AMCG00001365


Basic Information

Item Value
gene id AMCG00001365
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26904363 ~ 26954597 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001365
ATGTCCCTGTCCGTGTCTCTGAACGCCCGTCTCTCCTCGGCGCTGGCCGAGCTGCTGAGAGCCGCCCTGTGGGAGATCTGGAAGGCGGTGGAAGAGACGGTGTCGGAGCACCGAGAGGAAGCGGCCCGCAGGGACAGAGACAACGAGGCGCTGAGACGGAGGCTGCAGGAGCTCATGGTGGCGGGAGAGCAGGCTGTGTGTAACTGGCGCTGCGGAGCGGACGGGCGGCCGGAGAAGAGCCCCGGAGACGGGAAGGGGGAGTGGGGCAGCGGACTCTCGGGAGCCGCCGAAGGGTGCAAACGCAATGACTCCAGAAGAGTGCACTTCATCCCACTCCGGTACCGCACGCGTGGATGCGGGGACGGGTTCACTTCTCCGGGGAAAGGTCCCCACTCCCCCTTCCCGTCTCCGGGGCTCTTCTCCGGCCGCCCGTCCGCTCCGCAGCGCCAGTTACACACAGCCTGCTCTCCCGCCACCATGAGCTCCTGCAGCCTCCGTCTCAGCGCCTCGTTGTCTCTGTCCCTGCGGGCCGCTTCCTCTCGGTGCTCCGACACCGTCTCTTCCACCGCCTTCCAGATCTCCCACAGGGCGGCTCTCAGCAGCTCGGCCAGCGCCGAGGAGAGACGGGCGTTCAGAGACACGGACAGGGACATTTTTGCGGAACACTGGCAGAAGacaacacagaaagacagacccTGGGTTCAGTTCATGTTCTTTTCAGAAACAAgacACAGActacagacaggcagacagacagacagacaaacagacagagagagggaggcggcGGTCCGGACAGCTGTGAACGACACTGCGCGGAGCGGACAAAAGCATGATGGGAGCCCCCGGacaaactGA
>TU164234
ATTCGATcttttaaatgactgaattaattaaagtattatgACTTGCATAAGATcgtcatattatatatatatttgttataagCCCGCAGTCGTGTCTGTGCAGAATTTGGATCGTTCACGTGGCGCCgatgtccgcagctctgcgcgggtctgcgctgctccaccaatgggatctgcgcacttctgcagatctgcgcaaacGTGCGCTACAAAACCTCGGCAGAGTGTGCGTGTCGTGAGCGTTGAGCTCGGCAGCGCGGCGCTGGAGAAGCATCTACTTTTCTCATGTCCGCGTTTATTTCTGATGAGATGACAACACATACGTGTCTAATCTCATTACTTTGAGTGGTGTTGTACAAAAAGGCACATCAATACTTTTGGACTTTTgtcttttgcttttgtatttgcCATAGTTGTGGTTTTGTATATTAATAACAAGAATTGCTGACAGTAATCACACTGGGAAGTAGCAGCACTGGGAAGGTGGATGGGGCTCCAGTGTGATGCAGGATAAAGTGCCCACAGCCAGGCACTGGGAAAATCAGTGAGAAGCACAGGAAGGAGGAGCCAGTCCACATGGCAGAGCCAGGACCTGAGTAtgtcacacaaagacacaatcCAACAGGATCTGAGCACAGAAGAGAGGCACTCAGTAATCTGGATCCAAGGAACGTTCCACAAAAGCTAAACAGAGCTGGATCTATCACAAAATGGGAGCACACAAAAATGCAGTTGGATGAAATGGATACTGTTTCAGACCAGCATAATGACCTAGAGACTCTTAACATTAAACCCCAGTGCTACATtctgaacaaaaaacacagaagagtTAATTGGAGACCCTGTAGTTACTGTGCACAGTGTATAATTACTGCTCGCAATGTCAAAATACACCAGCACATCCACAGAGAAGAAAGGCTATACAGCTAAGTTCAGTTTGGAAACAAATTCAGCCAGTCAAGGAGCCTTAAGTTAAACCAGAtaattcacacaggagagagaccttACAGCTGTGTTCAGTGTGGAAAAGGTTTCATTACATCAGGAAATCTGAGACTTACCAAACTCACACAGTCTCACCATATAGCTATACTCTGTGTAAAAAAGGTGAATTACTGCATCTGAGCTTAAGAAACACCTGCAAATTCACACATCACATGGCTGTGCTCAACTGCAAATGTATGAAACACATGTGCGGGCACATCAAAGCCCACTGACAGACCCACACAGGAGGCTGAGGATGAATAGCCAATAATGTGAATcctaatgaaaaatgaaagtaCAAGACTGATGGACTTGTTCTCAAATTGTTAGCTTTTTGAACATGTTAATAGACATTACATAATTTAAGgtaattaagaaaaaagtttTCAGCTGTTGGTGCATTAACAAGGCAATGTCTTAAAACAAGAATATATTGGAGcagagattacattttaatgcaattagttttttttaatgtttttaaagacaaactGAACTAAagagcaaatgttttattttccatgtaatTGTAAGAGCAGGTAAATGTATATAGGTGAGCTGAATGATTTATTAAGCTTTGTTTAAATCTGATGGGTGAATAAGGATTGGTTGTATTATCCTTTCACTTTAAAATAGATCAGTCCTTTTGTCAAGAGAAATAAACTATtatagaaaatattgtgttgtgtggAAGGGGTACAGTTAGTTTGATCAAATGGAAAGCATAGAACTTGTGACTATTGAAAGCATATTTTTAGTAATTATTGGCAACAGTGCATTTTTGTGGGTGCCTTTTTCCac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001365 False 858 mRNA 0.64 6 26904363 26954291
TU164234 True 1785 TUCP 0.40 2 26951908 26954597

Neighbor

gene id symbol gene type direction distance location
AMCG00001363 NA coding upstream 66098 26836487 ~ 26838265 (+)
AMCG00001360 NA coding upstream 358854 26537952 ~ 26545509 (+)
AMCG00001357 NA coding upstream 385078 26511557 ~ 26519285 (+)
AMCG00001356 NA coding upstream 415372 26481391 ~ 26488991 (+)
AMCG00001355 NA coding upstream 451033 26445081 ~ 26453330 (+)
AMCG00001364 NA coding downstream 50048 27004645 ~ 27042352 (+)
G131021 NA non-coding upstream 110810 26793271 ~ 26793553 (+)
G131017 NA non-coding upstream 133202 26770880 ~ 26771161 (+)
G130948 NA non-coding upstream 569073 26296707 ~ 26335290 (+)
G130884 NA non-coding upstream 841670 26061148 ~ 26062693 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding upstream 1174526 25727853 ~ 25729837 (+)
G131072 NA non-coding downstream 24178 26978775 ~ 26980289 (+)
AMCG00001361 NA other upstream 23566 26856599 ~ 26880797 (+)
AMCG00001337 sumo1 other upstream 1154862 25735555 ~ 25749501 (+)
AMCG00001331 NA other upstream 1454053 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 2297891 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 2449978 24433793 ~ 24454385 (+)

Expression


Co-expression Network