G125485


Basic Information

Item Value
gene id G125485
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 92283 ~ 92620 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157269
TGGTTGGAAGAACAAGCTAGTGGCAATCACCACAGATGGAGCATCTGTAATGACTGATGTCAGTAACTACACCATTGTTTACTCCTAAGACTTTGATCCAACCAAAGCCACTGACATCTGGCATGCTGACAGTTTGCGCACACGCAGGCCTGACTTTGTGCGCAAACATGGAACAAAAGGAACAGAGGGTGGCTCAGATTCTGATGGCAcctctgaagaagaagaagagctCTGAAGACATGTGATTTAAATGATAGATATATCCCaaacttgaaatgaaatgtttgcactttctgtgtatattttgttgtgtttttcatgccaacaatgttaataaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157269 True 338 lncRNA 0.41 1 92283 92620

Neighbor

gene id symbol gene type direction distance location
AMCG00000681 NA coding upstream 51687 38752 ~ 40596 (+)
AMCG00000680 NA coding upstream 66002 21907 ~ 26281 (+)
AMCG00000683 unc80 coding downstream 45485 138105 ~ 143895 (+)
AMCG00000694 NA coding downstream 274956 367576 ~ 414428 (+)
AMCG00000695 cps1 coding downstream 321824 414444 ~ 414795 (+)
AMCG00000702 vwc2l coding downstream 1019261 1111881 ~ 1133185 (+)
AMCG00000705 NA coding downstream 1133697 1226317 ~ 1233934 (+)
G125484 NA non-coding upstream 998 91043 ~ 91285 (+)
G125510 pofut2 non-coding downstream 23491 116111 ~ 117302 (+)
G125516 NA non-coding downstream 36239 128859 ~ 129127 (+)
G125565 NA non-coding downstream 261868 354488 ~ 355729 (+)
G125597 NA non-coding downstream 363882 456502 ~ 487203 (+)
G125605 erbb4,LOC107555909,LOC107741926,LOC107662043,LOC107721020,LOC107660610 non-coding downstream 437279 529899 ~ 531912 (+)
G125561 NA other downstream 247020 339640 ~ 403591 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 1507076 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 1576225 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 1712787 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 5368681 5461301 ~ 5465981 (+)

Expression


Co-expression Network