G125497


Basic Information

Item Value
gene id G125497
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 91051 ~ 91285 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157281
NNNATTTTCATGATCAAACACAAGCCATTCACGACCCGTCAGCCATTTGgcattacaatttattttcttcgTTTCTCTGTCTTCATCCCCTGGCTCGTTCCTCTTCTCGCCCCCAGAAGTCTGTCCCAACCACCGCCGCATTTAGTTCAatctttactttactttactagCTAACTCGCTGCTCTTTCAGCTTCCGGCTCCGTTCGCTCTTATTCTTCCTCCGTTCGTTTCCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157281 True 235 lncRNA 0.46 1 91051 91285

Neighbor

gene id symbol gene type direction distance location
AMCG00000685 NA coding downstream 806 87659 ~ 90245 (-)
AMCG00000682 ramp1 coding downstream 14715 66652 ~ 76336 (-)
AMCG00000684 NA coding upstream 8784 100069 ~ 110524 (-)
AMCG00000686 pofut2,LOC107741944,LOC107660604,LOC107565035,LOC107714363 coding upstream 20877 112162 ~ 119898 (-)
AMCG00000689 NA coding upstream 40348 131633 ~ 142509 (-)
AMCG00000688 unc80 coding upstream 54494 145779 ~ 192328 (-)
AMCG00000690 NA coding upstream 216196 307481 ~ 329049 (-)
G125498 NA non-coding upstream 998 92283 ~ 92655 (-)
G125515 NA non-coding upstream 29995 121280 ~ 127663 (-)
G125578 NA non-coding upstream 284535 375820 ~ 376770 (-)
G125591 NA non-coding upstream 318330 409615 ~ 410817 (-)
G125622 NA non-coding upstream 432236 523521 ~ 527501 (-)
AMCG00000687 map2 other upstream 103359 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 1216536 1307821 ~ 1312408 (-)
G125814 NA other upstream 1295558 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 1387455 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 1670744 1762029 ~ 1771025 (-)

Expression


Co-expression Network