G125498



Basic Information


Item Value
gene id G125498
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 92283 ~ 92655 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU157282
agaaattatGAGTGCCACTGAATGCATTTGataattttattaacattgttggcatgaaaaacacaacaaaatatacacagaaagtgcaaacatttcatttcaagtttGGGATATATCTATCATTTAAATCACATGTCTTCAGagctcttcttcttcttcagaggTGCCATCAGAATCTGAGCCACCCTCTGTTCCTTTTGTTCCATGTTTGCGCACAAAGTCAGGCCTGCGTGTGCGCAAACTGTCAGCATGCCAGATGTCAGTGGCTTTGGTTGGATCAAAGTCTTAGGAGTAAACAATGGTGTAGTTACTGACATCAGTCATTACAGATGCTCCATCTGTGGTGATTGCCACTAGCTTGTTCTTCCAACCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU157282 True 373 lncRNA 0.40 1 92283 92655

Neighbor


gene id symbol gene type direction distance location
AMCG00000685 NA coding downstream 2038 87659 ~ 90245 (-)
AMCG00000682 ramp1 coding downstream 15947 66652 ~ 76336 (-)
AMCG00000684 NA coding upstream 7414 100069 ~ 110524 (-)
AMCG00000686 pofut2,LOC107741944,LOC107660604,LOC107565035,LOC107714363 coding upstream 19507 112162 ~ 119898 (-)
AMCG00000689 NA coding upstream 38978 131633 ~ 142509 (-)
AMCG00000688 unc80 coding upstream 53124 145779 ~ 192328 (-)
AMCG00000690 NA coding upstream 214826 307481 ~ 329049 (-)
G125497 NA non-coding downstream 998 91051 ~ 91285 (-)
G125515 NA non-coding upstream 28625 121280 ~ 127663 (-)
G125578 NA non-coding upstream 283165 375820 ~ 376770 (-)
G125591 NA non-coding upstream 316960 409615 ~ 410817 (-)
G125622 NA non-coding upstream 430866 523521 ~ 527501 (-)
G125625 NA non-coding upstream 505329 597984 ~ 598335 (-)
AMCG00000687 map2 other upstream 101989 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 1215166 1307821 ~ 1312408 (-)
G125814 NA other upstream 1294188 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 1386085 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 1669374 1762029 ~ 1771025 (-)

Expression



Co-expression Network