G125565


Basic Information

Item Value
gene id G125565
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 354488 ~ 355729 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157384
TACTGTGCAAGGTCAGTTTATTGTTCTGAACATACACGGTCAAGTagcaaacatgaaaaaaaaaaaaaaaaaccacaagtGCATCAGTAGTTCTGTCGTTGCTTACTATTACTGATAGAAAATTAAAGtcaaaaataacagaacatgaagcttaaaaagaaaaaaatcgaATCGTCTGTCTCCCATACCAAAAACTACAACAGTTATTTACAAATAGAGCATCGCAAAGCCTGAGTTGATCAATACCTAGAGTGCCTTAGAAAGtcaaatgtgttcaaataagtgagtgaaaagtttttttgtcttttcttttttcttttgtacaaAATCATAGACTAGAATAAACCTCCGTCAGTACGAGTCTACAGGTTCCTTTTCTAAAAAGTCTTCCAGGCTTCCTTCCGATCGCGCGCTCTCCAACTCTCTAACCAGCCGCCTCCGGAGAGACGCGCCCGTGTCGCCACCTGCTGGGACGGACTGTCCATCGGACCGGCCTTCcacagcgGGGGGGGAGGAACACttctctgctttttatttttcaactgaGATTTCTATATAGAGCCGCTCTGACCCGGGACTCTGAGCACGAAGAATCAAGGAAGGATTAGGCCCCGCCCCTTTGTGACATCACTAGGACAATTTTCATAGGTTTCGTTACGAACGTAAATCAGCATCAGGTAAGATAACTTGAGATTGATGGGATGACGACAGACCTAAAGCATGCATCTTTAGTCGGAGTGGACAGGAGTTAATGGCAGTGTGACGGTTAGCCACGGCTGGACATCGGTGATTCACACAGCGGCACTGAAGACAAGCGACAAGCTGCCCCAGACGCCCCCGGGCCAGGCCTGGCCGGGGCCCCGAGGCTGGGAGATTCTCTTTAGCGGCAGGAGCGGCGAGGCCCGCGTCTCGCCCCGATTCCAGGCTCTCGCTGTATCGTTGTACTTGAAGCGAACAAAATCGAAcgactggaaaaaacaaaaacaaaaaaacaaaacgaccgaaaacaaaaaacagaagcaagaGTGCAGAACGAAGGCGTGGAAGAGCGCCGGGCTGGGCCGGCCGGATCCACGGCAGCACGTCTGAGCTTACATCTCAAACGCCGGGAATCTGGACTTCAGCGGCTGCAGCAGGTCGGACAGGAAGTAGATGGTCCCGGCCATACCTagaaacgagagagagagagagagcggcaCTCGACTGGGCTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157384 True 1214 lncRNA 0.49 2 354488 355729

Neighbor

gene id symbol gene type direction distance location
AMCG00000683 unc80 coding upstream 210593 138105 ~ 143895 (+)
AMCG00000681 NA coding upstream 313892 38752 ~ 40596 (+)
AMCG00000680 NA coding upstream 328207 21907 ~ 26281 (+)
AMCG00000694 NA coding downstream 11847 367576 ~ 414428 (+)
AMCG00000695 cps1 coding downstream 58715 414444 ~ 414795 (+)
AMCG00000702 vwc2l coding downstream 756152 1111881 ~ 1133185 (+)
AMCG00000705 NA coding downstream 870588 1226317 ~ 1233934 (+)
AMCG00000708 NA coding downstream 893012 1248741 ~ 1249425 (+)
G125516 NA non-coding upstream 225361 128859 ~ 129127 (+)
G125510 pofut2 non-coding upstream 237186 116111 ~ 117302 (+)
G125485 NA non-coding upstream 261868 92283 ~ 92620 (+)
G125484 NA non-coding upstream 263203 91043 ~ 91285 (+)
G125597 NA non-coding downstream 100773 456502 ~ 487203 (+)
G125605 erbb4,LOC107555909,LOC107741926,LOC107662043,LOC107721020,LOC107660610 non-coding downstream 174170 529899 ~ 531912 (+)
G125612 NA non-coding downstream 219561 575290 ~ 575492 (+)
G125613 NA non-coding downstream 241058 596787 ~ 597135 (+)
G125684 myo1b non-coding downstream 948366 1304095 ~ 1307335 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 1243967 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 1313116 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 1449678 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 5105572 5461301 ~ 5465981 (+)
G127134 NA other downstream 8261470 8617199 ~ 8620195 (+)

Expression


Co-expression Network