G125613


Basic Information

Item Value
gene id G125613
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 596787 ~ 597135 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157440
CTCTCTCCTGCAGGACGGAGCTGGGGCTGATTATGGACTCGACCGGACCCGTCTGACACCCCCCCTCCTGGACGGCACTCACTGCACTCTCCCGGCTCGCGGTTGTTGCGGATCAGCGCCTTCTGGTTTCCGGTGCGGAACAGGCTGGTCCAGTTGACGGTGTTGTAGTAGCACAGCTGGGTGTTGTTGGTGATGTAGACGTTGCCGGCGCTGATCTCCTTCAGGGACTGCAGCTGCAGGGAGGAGACCCACTGCTGCTTCAGAACCAGCAGAGAGATGCCACTGCGGGAGCCAGAGAGAGGAGCGGGTCAGAACCGGCAgagacacgcacagacacacagagacacgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157440 True 349 lncRNA 0.62 1 596787 597135

Neighbor

gene id symbol gene type direction distance location
AMCG00000695 cps1 coding upstream 181992 414444 ~ 414795 (+)
AMCG00000694 NA coding upstream 182359 367576 ~ 414428 (+)
AMCG00000683 unc80 coding upstream 452892 138105 ~ 143895 (+)
AMCG00000681 NA coding upstream 556191 38752 ~ 40596 (+)
AMCG00000680 NA coding upstream 570506 21907 ~ 26281 (+)
AMCG00000702 vwc2l coding downstream 514746 1111881 ~ 1133185 (+)
AMCG00000705 NA coding downstream 629182 1226317 ~ 1233934 (+)
AMCG00000708 NA coding downstream 651606 1248741 ~ 1249425 (+)
AMCG00000704 NA coding downstream 659646 1256781 ~ 1272965 (+)
AMCG00000715 NA coding downstream 798261 1395396 ~ 1395970 (+)
G125612 NA non-coding upstream 21295 575290 ~ 575492 (+)
G125605 erbb4,LOC107555909,LOC107741926,LOC107662043,LOC107721020,LOC107660610 non-coding upstream 64875 529899 ~ 531912 (+)
G125597 NA non-coding upstream 109584 456502 ~ 487203 (+)
G125565 NA non-coding upstream 241058 354488 ~ 355729 (+)
G125516 NA non-coding upstream 467660 128859 ~ 129127 (+)
G125684 myo1b non-coding downstream 706960 1304095 ~ 1307335 (+)
G125713 NA non-coding downstream 726368 1323503 ~ 1328639 (+)
G125736 NA non-coding downstream 829498 1426633 ~ 1426943 (+)
G125767 NA non-coding downstream 997688 1594823 ~ 1609210 (+)
G125756 NA non-coding downstream 1020673 1617808 ~ 1621888 (+)
G125561 NA other upstream 193196 339640 ~ 403591 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 1002561 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 1071710 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 1208272 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 4864166 5461301 ~ 5465981 (+)
G127134 NA other downstream 8020064 8617199 ~ 8620195 (+)

Expression


Co-expression Network