G125642



Basic Information


Item Value
gene id G125642
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 887154 ~ 887476 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU157474
ctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcaggtcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtgcattgtacagtctgaacatcactgcccttgttctcaattctacacttttgacaatataccctaacatt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU157474 True 323 lncRNA 0.46 1 887154 887476

Neighbor


gene id symbol gene type direction distance location
AMCG00000701 NA coding downstream 27343 842271 ~ 859811 (-)
AMCG00000699 NA coding downstream 206671 679014 ~ 680483 (-)
AMCG00000698 erbb4 coding downstream 239741 643613 ~ 647413 (-)
AMCG00000700 LOC108441681,LOC108440448 coding downstream 274831 590845 ~ 612323 (-)
AMCG00000697 NA coding downstream 342998 542056 ~ 544156 (-)
AMCG00000703 NA coding upstream 247992 1135468 ~ 1148599 (-)
AMCG00000706 NA coding upstream 266834 1154310 ~ 1205897 (-)
AMCG00000707 NA coding upstream 382877 1270353 ~ 1276004 (-)
AMCG00000711 NA coding upstream 430572 1318048 ~ 1328817 (-)
AMCG00000709 NA coding upstream 450472 1337948 ~ 1344902 (-)
G125625 NA non-coding downstream 288819 597984 ~ 598335 (-)
G125622 NA non-coding downstream 359653 523521 ~ 527501 (-)
G125591 NA non-coding downstream 476337 409615 ~ 410817 (-)
G125578 NA non-coding downstream 510384 375820 ~ 376770 (-)
G125515 NA non-coding downstream 759491 121280 ~ 127663 (-)
G125685 NA non-coding upstream 381755 1269231 ~ 1307353 (-)
G125712 NA non-coding upstream 432058 1319534 ~ 1319813 (-)
G125719 NA non-coding upstream 436027 1323503 ~ 1328648 (-)
G125845 NA non-coding upstream 687885 1575361 ~ 1577346 (-)
G125875 NA non-coding upstream 934776 1822252 ~ 1827742 (-)
AMCG00000687 map2 other downstream 642977 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 420345 1307821 ~ 1312408 (-)
G125814 NA other upstream 499367 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 591264 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 874553 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 942068 1829544 ~ 1831310 (-)

Expression



Co-expression Network