G125814


Basic Information

Item Value
gene id G125814
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1386843 ~ 1422410 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157704
CAGATTCTACCATTTATTACACATAGTacattcttaaataaaaatgctccACAGAACAGTTCTTGCATAGATATCTTACAataccaatttaaaaaagaattaTGAAACAGAccagtaacaaaaataaattttcTTCTTCCTTAATAAAGAACATTACCGTACTAACatcatataatacaaataataatattttttaaacactttttacagcaaaattaaaaaataaacaaccaaaaacttaaaaaaaaagaaaaaaaaaaagaaagtgtcaaTGACAGAAGTAAGCACTGTGCcggtgggtggggggtgctggggagtgctggggctgggggggcgGTGAGTGACAGGGAGGGGGTCTCGGTGAAGGCGTGGCGTcttcaataatgaaaacagagCACAGGGCCGAGGAGCGGACCGGAAACCCGGCCGCCGAGTCCCCCGACTGGCGAACGAGAAGCACTTGTGGAGACCCCGAGCAAGGTCAGAGTTCTCCTTGGGCACCTCCAGGACCGACGTCTGCAGAACGCTTACAGGTACCGGCCCGGCACTCTCACTAACCGTGTGCGGCGTCGAGCCCTGTCTCTCCGGACTTACACGAGGCAAAGGAAACCAAACCGAACCGAACCAAAACAgaaccaaaaaaacaatgaaatagcAAGGCCTGTAGAAAATGCACAATAACACAGTTCAGGGCTGTCTGAGGGATTGAGGGCGGACCCTCTGTCTCCGAGCTCCAGACCCCGGGGCCCTTCAGCccagacggagagagagagatggggggagagaagagagagctGCCCAGCACAGACACTCaactcccagaatgcactgcgaAATTCTCTCTCCCAGAATGCATGGACCGAGAGATTAATTCTCCCAGACTGTGGCGAGGGCCCGGGCACGGGGTCCGGGGGTCCGCGGGtcagggtggtggtggtggtggtgggagcGGAACTGGGGCAGGAGGAGCGGAATGGTGAACCCCTGGTCTAACACAAGGACACAAGGAGTATGGACAATCACAGCAGATCTAAACAGACCCAAGAGCGCAGTACCCACGAGGGCTGGGGACCTGGTCCGGAGAGCTGGGGTCAGAACCAGCGCCTCCCAGCGTCCAGCTCAGGCCCGGGCTGGCCCAGGCGCCCGCGGCGGGGGGGTTTGTGTGAGGTGGGCACCGCATTCTCGGGCATCAGAACATGTTAAGTGGACACTTTGACAGAGGAGTGCTCGAACAGACAGGCTAGGCTAGCAGAACACAGAGTGCGGATCAtggactgaaatgttttgctgtGGCTAAGAAGAACACTTTTAATTCATCACAACTCATACAAGTCACCGATGACCTGAAGCCtgcgttatttatttttttgtgttttttatgttttttgtattttttttttatgagggggagtgtttttttgtgtttttgtatttttttgttgtttttgttgtttttgctaaaTGTACATCCTGCAGTTACAGGCAATAAGGACCTTATAAAACTAAACCCACATCACTCTGTACATCAAACTGTACTGATAAAGTCAACGGAGGACTGAACGTCTACAGCGTGTTCGGTTGCCGTCCTGCAGCGCCTCGTTCCCGGGCCGTGTCCAGTGCACGGGGCAGCTCGGGCGGGGGGGCAGCTCGGGGTTTTCAGGGGGCCAAGAATGAAGGGAAAGATTGATTTATCCACTTTGCTCACTTATTTACAGCGTTACCGCTCAATCTTTGGAAAAgtgtaaatgtgcattttgcatCTTTCCGCAAGCCGATCACACTGGGATGGCCGCTGTGTCTTTTTTTGGGAGGGAGGGATTAAACaatcacacagagagagagagagagagagagagagggagggagagagggagagggggcacTGATGTGCGCGTTCGCAGCGAGATCTGATCAGTTGATATTAGTTTAGTCTAGTGTACCTCCTCACCACCACTCGGCAATCCTTTCTGAAATGGAGGGGCTGGACTCGGGcaaaaatgtatctttgttttcttttttaaacgtgcatcatatatattttgaacaaatCCCCGTATTGTTGTTTGCTGCTCTTCAGGCGAGTGCAGGAAGCCAAGCAATACCGTGGTTGTGAGATTTCAAAgagagatacacagacacacatctgGTTTGGCGTGTTTTTCTCCACGGACACTCTGAAATACAGTACGTGTCTGTGTTCTGTGATTTTTCTCCAATTATACTCTGATGTACGGGTGCGTGTCTGTGTTGCGCCAGGTGATCGAATCACCAGGTCAGCTGGAACAGAAGAGTGAATTTGGAAAGGGGGTGCGGAGTGCAGGTCACAGTGGCGGGGGAGGGCAGTCGTGCATGCTGGGTAACGATGATGGCGAGAGAAGGAAAAAGGAGAGGGTAGACACTAGGACCCTGGGGCTGGCTCCCGTCACTCTCCTAATCCACCGCACTGCAGGCCCTTGATCTAATGGCTACATGGCTACTACTTTCATTATTTAATCGACGGCTAATGGCTTAATTGGCCTCTTTTCCCGAAACTCAATTAAGACAATTACCCGGGGCAAAGGCTCGTGATGCAGCGGAGGAGTCAGGTGTGCCGCCCCAGGGGTCGGGGACGCACAGCTGGCCAGACACGAGATGGAGGACCGGACGCTGTCAGGAGCCTCACAAACGTGTCACTTCAGAGATCCCTGTTCAGAGCTCCCTTATAAAATCGTGACAGTCGGGGGTCTCGGCTGCTTTTCCCTTCCCACCCCTCAAAACCGTGGCCTCAGCCGCACGGTGGGGCAGGAGAGCGGCGCGGCGATGGGGGCCACTCTCTCGCAGGCCTGGTTGGGGACTGATCCCGGAGCTTCGCTGGGAGACTCAAACAAAGTGCTTGAGGAAAACGGAAAACATCGCTGAGAATAATAATCGGACTTGATTGTTCGTATCGACCAGATACGGCTGCCCCCCGGGGACGGACCTCCGGGCTCGGCAGCCTTCTGGGCATGCTCAGAAACACAGACCTCATCCGGCCCCCTGTGAGTCACACGGCACTCGTGCGCAGCTCGCACACGCCACCGCAAACTGCGAATACAGGAGGGAATAAGGTACGCAGATCTTCACACAATTTGGCATGATTCGCGCCCCCGGAGAGACGCTATCGGCTGCAAGACAACGAGTCCCGGGCAGCGGCGCAGGCCCGCCAGGAACCATCAGAACTGTtcttgtttcgtttttttccccttgatttttttcttttcttttcataacaAAAAGCTGCGAGCAAAGAAAAAgtgttgtgtgcgtgtgtgcctgCGTGGGTCtggtctgtgagtgtgtgtgtcggtgtgtcagtgtgtgtgtgtgtcagtgaatggctgtgtgtgtgtgtcagtgtgtgtgtgtctgtgtgtgtgtgtcggtgaatgcctgtgtgtgtgtgtcagtgaatgcctgtgtgtgtgtgtgtgtcagtgggtgcttgtgtgtgtgttggtgtgtatttttttttttcccattttctttttttaagaaaaacaaaacaaaacacggagaacatttaaaaagtcagtGCAGACAACAGGGTAACAGACAGGCAAGTTTGTCTGGAGTTGACATGTCGGCGTGTTGTTTCTTTGTGGGCGGGGCGGGAGGACGAGTGACGGGGTCTCCTCAAAGTCGCGTGTCATTGTCGTCCCCCCGCCCCTCCTGGCTgtctgaggaagaggaggatcgGTGTGGCAGAGCTGGTCCCACACAGACGAGGAAGGCTCTTAATGCCGAAGAGCAGTTCAAGTTTTGTAGGCTGCAGATGAGAAGGTAAGCCTGGAGAGAGGTACGCTGTGGAGTTGTTCCAGGTGAGTGAACAACGAAacgaaatcaaacaaaaacaaataaatagaaacgaTCACAAACGAACGGACGCAGGCCTTCCCTTCCGTGGCCCGAGAGCGCCAAGCCTTGTGCCTCGTTCTCAGTTTGTCGTCCTCCTTTTGTAGTCCGCGCCTCATAGCAGCTGCTTTTTTCTCGTCTTTCTCTCGCTTCCGATCCCCGTCGACACGCGATCGTCCGCAAAGGCAAACAGTCTCAGTGagttttaagacatttcagCTCAGAATagacttacaaaacaaaaacaaacgcaaacaaacaaaatatacaaagtaaaaaaaggCAAGAAAGTGTCGCTGCGCGGTCGTGGCCGGTGAGGCGTCCGGCGTCCCAGTGAGGCAAGGAGCGCCCCCCCGCCCTGTCCCAGCCTGCCCCACTCTTCTCTCTTTTGGTTTCCACAGTTTGATCAGTTTCTTTGTTTGTCGTCTCCCCACAGTGGAGTTTGTGTAGTCTTGTGTTGCGTCTCCTTTgggtttggggtgggggggcagacaaatgggagaggaggagggaacGGACACGGCGGGAGGAACAGGGAGTCAAATGTCCAATGATTTCTGAGCAGCTTCGGCCAGGGGGGGTCCAGAGAGATCGCACTGCAGACTCACTGCTGCCAGGGCGCCTGTAGCTCAGATAACAGTATATCATGGAAAACatgtaataattacatatatatatatatatatatatatatatatatatatatacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157704 True 4580 TUCP 0.51 2 1386843 1422410

Neighbor

gene id symbol gene type direction distance location
AMCG00000709 NA coding downstream 41941 1337948 ~ 1344902 (-)
AMCG00000711 NA coding downstream 58026 1318048 ~ 1328817 (-)
AMCG00000707 NA coding downstream 110839 1270353 ~ 1276004 (-)
AMCG00000706 NA coding downstream 180946 1154310 ~ 1205897 (-)
AMCG00000703 NA coding downstream 238244 1135468 ~ 1148599 (-)
AMCG00000716 NA coding upstream 26432 1448842 ~ 1450137 (-)
AMCG00000718 NA coding upstream 46287 1468697 ~ 1470445 (-)
AMCG00000720 idh1 coding upstream 84891 1507301 ~ 1510191 (-)
AMCG00000721 NA coding upstream 88046 1510456 ~ 1511147 (-)
AMCG00000728 NA coding upstream 156389 1578799 ~ 1589393 (-)
G125719 NA non-coding downstream 58195 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 67030 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 79490 1269231 ~ 1307353 (-)
G125642 NA non-coding downstream 499367 887154 ~ 887476 (-)
G125625 NA non-coding downstream 788508 597984 ~ 598335 (-)
G125845 NA non-coding upstream 152951 1575361 ~ 1577346 (-)
G125875 NA non-coding upstream 399842 1822252 ~ 1827742 (-)
G126005 NA non-coding upstream 1005531 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 1038305 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 1135581 2557991 ~ 2558249 (-)
AMCG00000710 myo1b other downstream 74435 1307821 ~ 1312408 (-)
AMCG00000687 map2 other downstream 1142666 194644 ~ 244177 (-)
AMCG00000719 NA other upstream 56330 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 339619 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 407134 1829544 ~ 1831310 (-)
G126017 NA other upstream 1029458 2451868 ~ 2457883 (-)
G126089 NA other upstream 1614521 3036931 ~ 3041964 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037874 klf7b coding NC_007120.7 CM002893.2 28341109 ~ 28399071 (-)
grasscarp (Ctenopharyngodon idella) G81672 NA non-coding CI01000013 null 6083474 ~ 6084895 (+)
grasscarp (Ctenopharyngodon idella) CI01000069_01085974_01097576 METTL22 misc CI01000069 null 1085650 ~ 1097576 (-)
grasscarp (Ctenopharyngodon idella) G406927 NA non-coding CI01000299 null 3334043 ~ 3335207 (-)
rainbow trout (Oncorhynchus mykiss) G274996 NA non-coding NC_048567.1 CM023221.2 54929696 ~ 54933800 (-)