G125845


Basic Information

Item Value
gene id G125845
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1575361 ~ 1577346 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU157743
cGCATAACCGTTAACAAAATAcatcttcccccccccccagtaaaGAAGCAGGCACATTCCTCATGCAGTAAAGCTGTGACATGCAGatatacccccccacccccaagaaAACATCCGTCCTCTGCACACAGCTGCTGGGGACACCAGTGAGATCCAGCGGCCGGACTGCtgtgtagtgtgagtgtgtgtggacAGGTGAGGGGTGACCCGCTTCCAGTTGCTTTGTGTTGAAAGCGGGCTTTGTATGTTGATTGtatgcagcagtgtgtgtgtgtggtggggagAGGAGGCGAGTGTCCGCTACAGTCAGTCTGCTGGGCTGCAGTCTCGGTATAAGAGACAGCAGGcaggatacacacacacacgcacagacaacAGCCTTGTTCACACTGGCAGTTGGAAGGGACTCCAATCCGATTTAACTTCCCGACTGTCGCGTGTCTGAGCGGTCAGGCTGTAGTCTTCAAAGGCCGCTGCGCAGTGTAGGCGGTGGAGCCCGCGTGCTCCCCGGTTCACAACGATGCTGATTCTCATGGTGAGAACGATCGTGGCAGGATCCGCGTTCGTCCGTGCTTGTGATGATGTCATCAACGtgtcacatacagtgaggggaaaagcACTCATCTGACGTGACCGTTCAGACTCAAGTCACACAGCCAGGAAGCGGATGTCAGTCGGATTTAAACCTCCTCTGAATGTGGCTTGAAATATCTGTTCAGACGGCACAAAGTAAATCAGATTTGAGTCGCTTCAAACTGATCGAGTGATCCAAGAATGTGTTTGGAGCAAAAGCCGGCACTGGACCCGACTGGACTGGACCAGATTGGACGGGTTTGCCACACTTTCACCATGTTTTGCAATTAACTCCAGGTGTGGtgatttaattgcttttcaCAGGAAGTCGTTAATGACATCACCAGCGCCCCCGGGACGCCACAGGTGCTGAAACAGACTGTAGTCGGGGCCCGACGTCAGTATCACACATGATCAAATGCATTCGTTTCACAATCGATTTACAGTTTTGGTTATTCCTTCAACGTACAAGCGACGAGAGCAACACAATATCCAGAATCGAGTGacgataaaaaaataaaaacagaaatctgattaaataataaataagtaattaatcaaatgaatgaaataaacaggTCCAGGTCGAGCGTTTCTCCTCTCCGCCGGGCCGCAGGGGGAGTGTTCGCCCGTTCGCCGGGTACGACTTTACAACCACAGATGTGAACGACAAtcgatcaataaataaataaatataatttgtagaTAACGCAAGAGGAGAAGGCACTGATGGGCAGATGGCTGCGGCTCTGGGGGGCCCCGGACGCCCTCGGCAGGACACACGGCTCCCACATACAAAGACCggtgacctttgacctcagattgacccccccactccctctggACTTGTAATCTGTTCTGCATGTTGTGGGGCAGCTGGGGCTCGTGCTGCACAGGTTAGAGGTGGtcaaataagataaataaataaatataacagatTCCAAATCCATCCACAATGAATATTGAAAGGAAGGAATAAAGGCAGAAAGAGAAGGACAGGGGTGATGGTGGGAGCGCACAGCTGTGGAGGAGTGCGTCACACCCCTCCTGGGCAGGGTCTGAGCTACCCCCCCACCAGTatcccctgctctctctctctctctctctctctcccctccctccgtctctttctctctatggGGGCCGCAGCCTCTCTCTCGCCCTCCTTCCTCCCGTCTTCCTCCCTTTCCCTCCGTCTCTCAGCTCGATTCACTTCGAAGGTGCTCTGTTGCCGTTGTCGATCCATCTCTCCCCGTCTGTAGGGGCAGAGCAGCTCTgtctccttttttctctctatttctctctctctctctctctctccttccctccctccctcacaggGGCGTCCCCTCCTCGTCGATGTAGCTGATGTGCTCGGTGCTGGGGTGCTGCCCCCCGGCCCCCCACTCTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU157743 True 1986 lncRNA 0.52 1 1575361 1577346

Neighbor

gene id symbol gene type direction distance location
AMCG00000721 NA coding downstream 64214 1510456 ~ 1511147 (-)
AMCG00000720 idh1 coding downstream 65170 1507301 ~ 1510191 (-)
AMCG00000718 NA coding downstream 104916 1468697 ~ 1470445 (-)
AMCG00000716 NA coding downstream 125224 1448842 ~ 1450137 (-)
AMCG00000709 NA coding downstream 230459 1337948 ~ 1344902 (-)
AMCG00000728 NA coding upstream 1453 1578799 ~ 1589393 (-)
AMCG00000727 rab5b,LOC108266395,LOC108430508,LOC107551955,LOC107738511,LOC100697826,LOC107598172,LOC107698530 coding upstream 17471 1594817 ~ 1599675 (-)
AMCG00000726 NA coding upstream 31737 1609083 ~ 1611379 (-)
AMCG00000732 satb2 coding upstream 120867 1698213 ~ 1704869 (-)
AMCG00000742 NA coding upstream 240117 1817463 ~ 1822204 (-)
G125719 NA non-coding downstream 246713 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 255548 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 268008 1269231 ~ 1307353 (-)
G125642 NA non-coding downstream 687885 887154 ~ 887476 (-)
G125625 NA non-coding downstream 977026 597984 ~ 598335 (-)
G125875 NA non-coding upstream 244906 1822252 ~ 1827742 (-)
G126005 NA non-coding upstream 850595 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 883369 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 980645 2557991 ~ 2558249 (-)
G126275 NA non-coding upstream 1973494 3550840 ~ 3552977 (-)
AMCG00000719 NA other downstream 74700 1478740 ~ 1500661 (-)
G125814 NA other downstream 152951 1386843 ~ 1422410 (-)
AMCG00000710 myo1b other downstream 262953 1307821 ~ 1312408 (-)
AMCG00000687 map2 other downstream 1331184 194644 ~ 244177 (-)
AMCG00000731 NA other upstream 184683 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 252198 1829544 ~ 1831310 (-)
G126017 NA other upstream 874522 2451868 ~ 2457883 (-)
G126089 NA other upstream 1459585 3036931 ~ 3041964 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other upstream 1466821 3044167 ~ 3050016 (-)

Expression


Co-expression Network