G126036


Basic Information

Item Value
gene id G126036
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 2557992 ~ 2558257 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU158014
gtagaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttctcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgac

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU158014 True 266 lncRNA 0.48 1 2557992 2558257

Neighbor

gene id symbol gene type direction distance location
AMCG00000764 dnah7 coding upstream 38964 2467362 ~ 2519028 (+)
AMCG00000760 LOC106581656 coding upstream 95508 2423045 ~ 2462484 (+)
AMCG00000761 NA coding upstream 167529 2389675 ~ 2390463 (+)
AMCG00000762 NA coding upstream 175982 2345321 ~ 2382010 (+)
AMCG00000758 cops8,LOC106581673,LOC103132569 coding upstream 331631 2213649 ~ 2226361 (+)
AMCG00000766 tmeff2,LOC106581686 coding downstream 402232 2960489 ~ 2977911 (+)
AMCG00000769 tmeff2a,tmeff2,LOC107670719,LOC107728299 coding downstream 438256 2996513 ~ 3011360 (+)
AMCG00000768 NA coding downstream 466261 3024518 ~ 3037733 (+)
AMCG00000767 NA coding downstream 498165 3056422 ~ 3061712 (+)
AMCG00000774 hspd1 coding downstream 564091 3122348 ~ 3133195 (+)
G125986 NA non-coding upstream 37407 2427670 ~ 2520585 (+)
G125955 NA non-coding upstream 264120 2291835 ~ 2293872 (+)
G125756 NA non-coding upstream 936104 1617808 ~ 1621888 (+)
G125767 NA non-coding upstream 948782 1594823 ~ 1609210 (+)
G125736 NA non-coding upstream 1131049 1426633 ~ 1426943 (+)
G126044 NA non-coding downstream 207998 2766255 ~ 2766539 (+)
G126050 NA non-coding downstream 312659 2870916 ~ 2885184 (+)
G126054 NA non-coding downstream 451986 3010243 ~ 3068463 (+)
G126068 NA non-coding downstream 523489 3081746 ~ 3083587 (+)
G126215 NA non-coding downstream 997309 3555566 ~ 3558424 (+)
AMCG00000734 NA other upstream 743835 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 859419 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 951961 1599696 ~ 1606031 (+)
G125561 NA other upstream 2154401 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 2903044 5461301 ~ 5465981 (+)
G127134 NA other downstream 6058942 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 7542026 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 9441407 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 9730693 12288950 ~ 12385042 (+)

Expression


Co-expression Network