G128101


Basic Information

Item Value
gene id G128101
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12606039 ~ 12655172 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160600
TCAAAAGtcaaaatagtgttttattagTGACCACTTGGAtagaatatatttcaaatacatcaaGGTAGATTCTGAATGTCTGGTGGCCTTAGcagttacagtattttaaaaatattgtcaaatagtattttatggttttatttttttttaatacaagttCTTTTATCGAAATTCTAGTTACTAGAATAATTAACTCCAGTAACAAGATTGTATAGCACTCATAATCTACATTTTAGCTTACATTACACAATCTGCATAATGAAAGTCAGaaacgtgtatatatattgtatgtgtatatacacacgtgtgtatatatatatatatatatatatatacatacatacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160600 True 347 lncRNA 0.26 2 12606039 12655172

Neighbor

gene id symbol gene type direction distance location
AMCG00001025 NA coding upstream 69973 12529789 ~ 12536066 (+)
AMCG00001028 NA coding upstream 76935 12523818 ~ 12529104 (+)
AMCG00001027 LOC106581757,LOC105908008 coding upstream 88087 12497386 ~ 12517952 (+)
AMCG00001026 LOC106586233 coding upstream 110822 12469940 ~ 12495217 (+)
AMCG00001029 zgc:171558,rapgef4,LOC107659975,LOC107551930,LOC107581390,LOC107752096 coding upstream 150481 12444860 ~ 12455558 (+)
AMCG00001036 sp9,LOC106586239 coding downstream 33606 12688778 ~ 12690656 (+)
AMCG00001037 NA coding downstream 42047 12697219 ~ 12707783 (+)
AMCG00001047 NA coding downstream 157242 12812414 ~ 12813367 (+)
AMCG00001052 NA coding downstream 341940 12997112 ~ 12998946 (+)
AMCG00001050 NA coding downstream 347763 13002935 ~ 13004035 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding upstream 65721 12540081 ~ 12540318 (+)
G127924 NA non-coding upstream 509176 12094141 ~ 12096863 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 863289 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 2161102 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 3228450 9363107 ~ 9377589 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 182479 12837651 ~ 12841008 (+)
G128255 NA non-coding downstream 702319 13357491 ~ 13382644 (+)
G128294 NA non-coding downstream 806494 13461666 ~ 13463482 (+)
G128402 NA non-coding downstream 1429114 14084286 ~ 14084930 (+)
G128662 NA non-coding downstream 2118446 14773618 ~ 14776723 (+)
AMCG00001022 NA other upstream 220997 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 594614 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 2451852 10100283 ~ 10154187 (+)
G127134 NA other upstream 3985844 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 7140058 5461301 ~ 5465981 (+)
AMCG00001098 NA other downstream 2495103 15150275 ~ 15184392 (+)
G128823 NA other downstream 2753940 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 2805360 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 5367888 18023060 ~ 18044251 (+)
G129453 NA other downstream 5890721 18545893 ~ 18547915 (+)

Expression


Co-expression Network