G128107 (ola1,LOC107660044)


Basic Information

Item Value
gene id G128107
gene name ola1,LOC107660044
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12638985 ~ 12676174 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU160610
CTGAAACGTACCCTGACGGTCCAAGCGCGCACTTCATCTGGTCCGGCGGTGAAAAAGTATTCAAGCTGGAGAGCCGAATAGCCAGTCTTGATGATCTTGGTTAACACACTTTGTGTCTTGTGCTCCTCCGTGTActtctttttttcctcatcGCTCATGTCTTGTAGCTTGAGCTCCAGCCCACCGCTAAAAGGGATGACCAGGGCTCCTGGGTCATGGCTGTCCACCCACTCTTTAATTTTTACCAAcatttgttcttttttctaatGTAGTCCTTTTCAGATAGGTTGACGAGATAAATCATTGGCTTGGAAGTcaaaagcaaatatttgttCAGCACTTCAATCTCCTTGTCGTTCCATTCGTGATTGTAACGGACATGTTTCTTTTCATCCACTACCCAGTTCTTGATTTTGCACATTATGTCATATTCAGGTTTCAGCTTTTTGTCTCCTCCTCTAACAGCCACTTTCTCCAGTTTTTCAATGATTGGTCCGATGAGCTCCACGTCCTTTAGCCGCAGCTCCTCGTGAATGATTTCCATGTCCCGCACCGGATCCACACAGCCCTCCACGTGGATGATATCTTCGTCTTCAAAAGCACCTAGGGTCATGTGGAAAATGGCATCACAGGCACTGATGTGTGACAGGAAAGCATTTCCCAGGCCCTGTCCAGCATGGGCTCCCTTCACCAGACCAGCAATATCCACCACGTTAAGAAACGCAGGAACTTTGCT
>TU160612
CTGAAACGTACCCTGACGGTCCAAGCGCGCACTTCATCTGGTCCGGCGGTGAAAAAGTATTCAAGCTGGAGAGCCGAATAGCCAGTCTTGATGATCTTGGTTAACACACTTTGTGTCTTGTGCTCCTCCGTGTActtctttttttcctcatcGCTCATGTCTTGTAGCTTGAGCTCCAGCCCACCGCTAAAAGGGATGACCAGGGCTCCTGGGTCATGGCTGTCCACCCACTCTTTAATTTTTACCAACCTGTAGACAAAGAGGGCAGTGGCATTAACATCTGCTGCTCGCATGACAGTGCTACATT

Function

symbol description
ola1 Predicted to enable ATP hydrolysis activity. Predicted to be located in nucleolus. Predicted to be active in cytoplasm. Orthologous to human OLA1 (Obg like ATPase 1).

NR:

description
PREDICTED: obg-like ATPase 1 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU160610 True 736 lncRNA 0.47 6 12638985 12676174
TU160612 False 307 lncRNA 0.50 2 12638985 12639888

Neighbor

gene id symbol gene type direction distance location
AMCG00001025 NA coding upstream 102919 12529789 ~ 12536066 (+)
AMCG00001028 NA coding upstream 109881 12523818 ~ 12529104 (+)
AMCG00001027 LOC106581757,LOC105908008 coding upstream 121033 12497386 ~ 12517952 (+)
AMCG00001026 LOC106586233 coding upstream 143768 12469940 ~ 12495217 (+)
AMCG00001029 zgc:171558,rapgef4,LOC107659975,LOC107551930,LOC107581390,LOC107752096 coding upstream 183427 12444860 ~ 12455558 (+)
AMCG00001036 sp9,LOC106586239 coding downstream 12604 12688778 ~ 12690656 (+)
AMCG00001037 NA coding downstream 21045 12697219 ~ 12707783 (+)
AMCG00001047 NA coding downstream 136240 12812414 ~ 12813367 (+)
AMCG00001052 NA coding downstream 320938 12997112 ~ 12998946 (+)
AMCG00001050 NA coding downstream 326761 13002935 ~ 13004035 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding upstream 98667 12540081 ~ 12540318 (+)
G127924 NA non-coding upstream 542122 12094141 ~ 12096863 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 896235 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 2194048 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 3261396 9363107 ~ 9377589 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 161477 12837651 ~ 12841008 (+)
G128255 NA non-coding downstream 681317 13357491 ~ 13382644 (+)
G128294 NA non-coding downstream 785492 13461666 ~ 13463482 (+)
G128402 NA non-coding downstream 1408112 14084286 ~ 14084930 (+)
G128662 NA non-coding downstream 2097444 14773618 ~ 14776723 (+)
AMCG00001022 NA other upstream 253943 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 627560 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 2484798 10100283 ~ 10154187 (+)
G127134 NA other upstream 4018790 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 7173004 5461301 ~ 5465981 (+)
AMCG00001098 NA other downstream 2474101 15150275 ~ 15184392 (+)
G128823 NA other downstream 2732938 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 2784358 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 5346886 18023060 ~ 18044251 (+)
G129453 NA other downstream 5869719 18545893 ~ 18547915 (+)

Expression


Co-expression Network