G129719


Basic Information

Item Value
gene id G129719
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 20305643 ~ 20305857 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU162663
actctcttaccttccattgactgtttttcccatctgtcaactgtgctacctcctctttgttctcctccctcacctcctcccttggctctctctgtcctctcacgtctcgtcctgcccgtccctcccctcctcagccttggctctctgctgttctccgtgcaacccgaactagtctgcgtgccgccgaacagaagtggaaaaggaccaaactccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162663 True 215 lncRNA 0.56 1 20305643 20305857

Neighbor

gene id symbol gene type direction distance location
AMCG00001227 NA coding upstream 114647 20165005 ~ 20190996 (+)
AMCG00001226 NA coding upstream 154258 20131487 ~ 20151385 (+)
AMCG00001228 NA coding upstream 194058 20106055 ~ 20111585 (+)
AMCG00001219 NA coding upstream 1062132 19231063 ~ 19243511 (+)
AMCG00001220 NA coding upstream 1113546 19190051 ~ 19192097 (+)
AMCG00001230 NA coding downstream 297218 20603075 ~ 20608903 (+)
AMCG00001234 NA coding downstream 381633 20687490 ~ 20699600 (+)
AMCG00001237 ahr1b,LOC107600975,LOC107586968,LOC107751479,LOC107687868,LOC107653601 coding downstream 402430 20708287 ~ 20714482 (+)
AMCG00001235 NA coding downstream 443945 20749802 ~ 20778646 (+)
AMCG00001240 NA coding downstream 537261 20843118 ~ 20844227 (+)
G129708 LOC107575789 non-coding upstream 210576 19995027 ~ 20095067 (+)
G129696 NA non-coding upstream 523781 19781647 ~ 19781862 (+)
G129695 NA non-coding upstream 524036 19781250 ~ 19781607 (+)
G129689 NA non-coding upstream 652134 19637602 ~ 19653509 (+)
G129674 arl4c,LOC105900932,LOC103482382,LOC105937943 non-coding upstream 927730 19373023 ~ 19377913 (+)
G129756 NA non-coding downstream 290574 20596431 ~ 20596752 (+)
G129904 NA non-coding downstream 935480 21241337 ~ 21241568 (+)
G129961 NA non-coding downstream 1103077 21408934 ~ 21409691 (+)
G129972 LOC106582529,LOC105005782 non-coding downstream 1150162 21456019 ~ 21456860 (+)
G129984 NA non-coding downstream 1235606 21541463 ~ 21541672 (+)
AMCG00001223 s100b,LOC106574292 other upstream 813299 19478260 ~ 19492344 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other upstream 1163498 19043304 ~ 19142145 (+)
AMCG00001203 NA other upstream 1415919 18888284 ~ 18889724 (+)
G129442 NA other upstream 1747469 18555151 ~ 18558174 (+)
G129453 NA other upstream 1757728 18545893 ~ 18547915 (+)
AMCG00001229 NA other downstream 158506 20464363 ~ 20496368 (+)
AMCG00001236 LOC105905668,LOC108414761 other downstream 305415 20611272 ~ 20676857 (+)
AMCG00001241 NA other downstream 600514 20906371 ~ 20925240 (+)
G129843 LOC107575789 other downstream 636215 20942072 ~ 20942397 (+)
G129877 NA other downstream 771278 21077135 ~ 21078870 (+)

Expression


Co-expression Network