G129756


Basic Information

Item Value
gene id G129756
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 20596431 ~ 20596752 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU162700
atttgaaaagatcaagtcaatacatgcgctctctctggttggttccctgacaaattgagttagaaagcagtcatttaccatctcaaccatttctatttctgcttctgtagtccccactgggctttcccagtctatgtttgggaaattgaaatcccccattataacagccacatccttgctacatgcagtcctgattacactgtacaatgcagcatctttctgaatatctgagtttggtggcctgtaacacactcctaccgctaatcctccagatctcttgttcaaaagtttcacccacaaagattctgttccgttactggga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162700 True 322 lncRNA 0.43 1 20596431 20596752

Neighbor

gene id symbol gene type direction distance location
AMCG00001227 NA coding upstream 405435 20165005 ~ 20190996 (+)
AMCG00001226 NA coding upstream 445046 20131487 ~ 20151385 (+)
AMCG00001228 NA coding upstream 484846 20106055 ~ 20111585 (+)
AMCG00001219 NA coding upstream 1352920 19231063 ~ 19243511 (+)
AMCG00001220 NA coding upstream 1404334 19190051 ~ 19192097 (+)
AMCG00001230 NA coding downstream 6323 20603075 ~ 20608903 (+)
AMCG00001234 NA coding downstream 90738 20687490 ~ 20699600 (+)
AMCG00001237 ahr1b,LOC107600975,LOC107586968,LOC107751479,LOC107687868,LOC107653601 coding downstream 111535 20708287 ~ 20714482 (+)
AMCG00001235 NA coding downstream 153050 20749802 ~ 20778646 (+)
AMCG00001240 NA coding downstream 246366 20843118 ~ 20844227 (+)
G129719 NA non-coding upstream 290574 20305643 ~ 20305857 (+)
G129708 LOC107575789 non-coding upstream 501364 19995027 ~ 20095067 (+)
G129696 NA non-coding upstream 814569 19781647 ~ 19781862 (+)
G129695 NA non-coding upstream 814824 19781250 ~ 19781607 (+)
G129689 NA non-coding upstream 942922 19637602 ~ 19653509 (+)
G129904 NA non-coding downstream 644585 21241337 ~ 21241568 (+)
G129961 NA non-coding downstream 812182 21408934 ~ 21409691 (+)
G129972 LOC106582529,LOC105005782 non-coding downstream 859267 21456019 ~ 21456860 (+)
G129984 NA non-coding downstream 944711 21541463 ~ 21541672 (+)
G129985 NA non-coding downstream 954678 21551430 ~ 21554095 (+)
AMCG00001229 NA other upstream 100063 20464363 ~ 20496368 (+)
AMCG00001223 s100b,LOC106574292 other upstream 1104087 19478260 ~ 19492344 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other upstream 1454286 19043304 ~ 19142145 (+)
AMCG00001203 NA other upstream 1706707 18888284 ~ 18889724 (+)
G129442 NA other upstream 2038257 18555151 ~ 18558174 (+)
AMCG00001236 LOC105905668,LOC108414761 other downstream 14520 20611272 ~ 20676857 (+)
AMCG00001241 NA other downstream 309619 20906371 ~ 20925240 (+)
G129843 LOC107575789 other downstream 345320 20942072 ~ 20942397 (+)
G129877 NA other downstream 480383 21077135 ~ 21078870 (+)
G129913 NA other downstream 674632 21271384 ~ 21276879 (+)

Expression


Co-expression Network