G129877


Basic Information

Item Value
gene id G129877
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 21077135 ~ 21078870 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU162840
ctccacctcaagctctgagtccttatgaggacccagagacaggcagtcctcctcccaggtggcccgtctgctgccccctgctgggatggggcagacagactcccttCAGTCTCCACCAGAAGCTTTGGTCCATCCTACTAttgagagcaaggatggcctcatcgcgcTCACTGTCCGCTGATCCTGACCTCCTTCGCCGACGACGCAGCGGAGAGAAAGCCAGCAAAAACTCGGAAAAGAGGGAAAGAGCCCGGGGGCGTCGCTCCACCGCTCTTCCTTGTCGCTCATGTGTGCACAACCACGCAACCGCGGGCACTGCAGGCAAGGGGGGCGTGGCTGTCGCGGGGGacgcagctgccgtggcaggtgcggaAGCGACAGCCAGCGCAGCAGCGGGGGCAGGAGGAGACGCAGGCGCAGGCTGTCTCTGatcctgcagccctggaggaggaggcggggggGCTCGGAGAGAGGTGGAGGTCCAGGACCCTCGAAGCCCCCCCGTCACTCACCGGAGTGGGGGATCTCTGGACGTGGCGGCGATTGCGGCGGCGCCCGGTGAAATGGCGGACCTCCGAGCGCGCCGTAGCGGACCCGGAAGtcgcgggctgtagtgcaggcgcaagccggcggaggagcacctcacgcagGCGAGATCTCTTctgacacaccgaggctcaggccgggcagccgcgACTCGGATTTTACTgacgctgctagcgctcctgctgtggaggaaaaaggcctgtggacaaaaaaccaacacagcaagcagtcggaatattagacactatataaacacgactattatttttaaagtgtcctatttgtagccgaaactgaaaccgaagcgcACCAGAGCCCCGGAGTGCGGACGGAACAGAGTCAGATCAaggcgaagaggcaaaagaggatgaacctgcgctgacgtcgtgttttatagaacaggaagtgggaagggacctgttctgagtgaagagcgcaggggccaatggcagctttgatagagtgacgtttcgatcaggttcccgcGGAAGAGCGCataaacccctcccccttgggcagtgcttccgacttgaaagataactgtaatacagtataaaattacagatcaaaaccaTAATATTGTAATGAGTTGAGGGGCCGGGTCTTCGATCATCATTATGTGCCTGCCCTAATTTTCTCTTTTGCCATagacaggaccatggacagcagagcCAGACCCTCCATGGATCAGGAACATGGACAGCCTAATGGAAAAACACTGGCAAGGCAGCAGAACAGCCTCACCTGCCTGTGATTACAAATCACCCAGACTGCAAGCAGGTGTGGCTGATTAGTACAGACTATTTAAACTCACCCTGTGGTTTCTTCTTGGTCTTAGAatggggtgggggaggaagACAAGGAGGGTGACTAGAGGAGCAAAGAAAGGACAAAGTAATTGGATTGGAAACTAGATGACAActtggactggctgaggacctTGAACGGCGTTTGGATTGTTTTGGAAGACTACGACCCTGGTGAAGACCCCTGAAACCCCGTTTTGACCATGAGACTGCCTAACCCCTCAAGACTGTTTAGTTTGTCAGTCTTTGTTTGTTAACCCTGGGAAACCGCTTAGCTGTCCAAGGCCAGTCaggaattttgtttttgtgtagcaGACCATTCCTGCTACAGAAAGTGCTCTGTACAAAGagctaggtttttgttttccaggacagaactaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162840 True 1736 TUCP 0.55 1 21077135 21078870

Neighbor

gene id symbol gene type direction distance location
AMCG00001243 gls,LOC105022419,LOC102789803 coding upstream 81673 20968716 ~ 20995462 (+)
AMCG00001239 NA coding upstream 205492 20858612 ~ 20871643 (+)
AMCG00001238 NA coding upstream 220791 20847770 ~ 20856344 (+)
AMCG00001240 NA coding upstream 232908 20843118 ~ 20844227 (+)
AMCG00001235 NA coding upstream 298489 20749802 ~ 20778646 (+)
AMCG00001248 NA coding downstream 36405 21115275 ~ 21118948 (+)
AMCG00001250 LOC105905614 coding downstream 102767 21181637 ~ 21203572 (+)
AMCG00001249 abcb6a,abcb6 coding downstream 145735 21224605 ~ 21226842 (+)
AMCG00001252 cnppd1 coding downstream 225403 21304273 ~ 21315646 (+)
AMCG00001253 ttll4,LOC102787029 coding downstream 240600 21319470 ~ 21340288 (+)
G129756 NA non-coding upstream 480383 20596431 ~ 20596752 (+)
G129719 NA non-coding upstream 771278 20305643 ~ 20305857 (+)
G129708 LOC107575789 non-coding upstream 982068 19995027 ~ 20095067 (+)
G129696 NA non-coding upstream 1295273 19781647 ~ 19781862 (+)
G129695 NA non-coding upstream 1295528 19781250 ~ 19781607 (+)
G129904 NA non-coding downstream 162467 21241337 ~ 21241568 (+)
G129961 NA non-coding downstream 330064 21408934 ~ 21409691 (+)
G129972 LOC106582529,LOC105005782 non-coding downstream 377149 21456019 ~ 21456860 (+)
G129984 NA non-coding downstream 462593 21541463 ~ 21541672 (+)
G129985 NA non-coding downstream 472560 21551430 ~ 21554095 (+)
G129843 LOC107575789 other upstream 134738 20942072 ~ 20942397 (+)
AMCG00001241 NA other upstream 151895 20906371 ~ 20925240 (+)
AMCG00001236 LOC105905668,LOC108414761 other upstream 400278 20611272 ~ 20676857 (+)
AMCG00001229 NA other upstream 580767 20464363 ~ 20496368 (+)
AMCG00001223 s100b,LOC106574292 other upstream 1584791 19478260 ~ 19492344 (+)
G129913 NA other downstream 192514 21271384 ~ 21276879 (+)
AMCG00001260 NA other downstream 892429 21971299 ~ 21992332 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other downstream 1111038 22189908 ~ 22238654 (+)
AMCG00001278 ercc3,LOC107706662 other downstream 1421165 22500035 ~ 22530836 (+)
G130335 NA other downstream 2087393 23166263 ~ 23166656 (+)

Expression


Co-expression Network