G129904


Basic Information

Item Value
gene id G129904
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 21241337 ~ 21241568 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU162870
ACCTTGCGGAGGTGGTCGATGAGGCACTGGCTCGGTCGCAGGGTTCCCCAGAACTGAGAGAAGGTGGTCCCCCAGGGGGCCCCACTCACCAGGGCCACGTTGCGATGTTTGCCAGAGATGCGCAGTTTTCTGGCCAGGGTGGCGCTGTAGCTCTGCTCCACAAAGAGCAGCACGCGGCGGGCCTGGCAGCCCTCCAGGTCCGACAGCAACTCGCTCACCGAGTACCGCTCCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU162870 True 232 lncRNA 0.65 1 21241337 21241568

Neighbor

gene id symbol gene type direction distance location
AMCG00001249 abcb6a,abcb6 coding upstream 14495 21224605 ~ 21226842 (+)
AMCG00001250 LOC105905614 coding upstream 37765 21181637 ~ 21203572 (+)
AMCG00001248 NA coding upstream 122389 21115275 ~ 21118948 (+)
AMCG00001243 gls,LOC105022419,LOC102789803 coding upstream 245875 20968716 ~ 20995462 (+)
AMCG00001239 NA coding upstream 369694 20858612 ~ 20871643 (+)
AMCG00001252 cnppd1 coding downstream 62705 21304273 ~ 21315646 (+)
AMCG00001253 ttll4,LOC102787029 coding downstream 77902 21319470 ~ 21340288 (+)
AMCG00001254 LOC108266105,LOC107596559,LOC107738101,LOC107752899 coding downstream 102299 21343867 ~ 21353441 (+)
AMCG00001259 NA coding downstream 810302 22051870 ~ 22083241 (+)
AMCG00001265 NA coding downstream 918823 22160391 ~ 22169050 (+)
G129756 NA non-coding upstream 644585 20596431 ~ 20596752 (+)
G129719 NA non-coding upstream 935480 20305643 ~ 20305857 (+)
G129708 LOC107575789 non-coding upstream 1146270 19995027 ~ 20095067 (+)
G129696 NA non-coding upstream 1459475 19781647 ~ 19781862 (+)
G129695 NA non-coding upstream 1459730 19781250 ~ 19781607 (+)
G129961 NA non-coding downstream 167366 21408934 ~ 21409691 (+)
G129972 LOC106582529,LOC105005782 non-coding downstream 214451 21456019 ~ 21456860 (+)
G129984 NA non-coding downstream 299895 21541463 ~ 21541672 (+)
G129985 NA non-coding downstream 309862 21551430 ~ 21554095 (+)
G129989 NA non-coding downstream 366272 21607840 ~ 21608250 (+)
G129877 NA other upstream 162467 21077135 ~ 21078870 (+)
G129843 LOC107575789 other upstream 298940 20942072 ~ 20942397 (+)
AMCG00001241 NA other upstream 316097 20906371 ~ 20925240 (+)
AMCG00001236 LOC105905668,LOC108414761 other upstream 564480 20611272 ~ 20676857 (+)
AMCG00001229 NA other upstream 744969 20464363 ~ 20496368 (+)
G129913 NA other downstream 29816 21271384 ~ 21276879 (+)
AMCG00001260 NA other downstream 729731 21971299 ~ 21992332 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other downstream 948340 22189908 ~ 22238654 (+)
AMCG00001278 ercc3,LOC107706662 other downstream 1258467 22500035 ~ 22530836 (+)
G130335 NA other downstream 1924695 23166263 ~ 23166656 (+)

Expression


Co-expression Network