G130153



Basic Information


Item Value
gene id G130153
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 22582698 ~ 22582964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU163154
atgattcatggacattatcagtggaggaacatttattgcgatgctatatattcgtggagtaaaagtgttcatctggagagggctgtcaaaatgcagtgtgaggtacgagctcatgcagggaaagtgcagaaacatgtcctgtgtggactgtcccgagctgtcaggtatgcaggctaaatatatagtaaatagtttattgaaatacactgattttattcactgtagctttgtatgttgaaaacaaagtttacacagtgttgaaaatgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU163154 True 267 lncRNA 0.39 1 22582698 22582964

Neighbor


gene id symbol gene type direction distance location
AMCG00001275 ercc3,LOC107706662 coding upstream 17078 22551140 ~ 22565620 (+)
AMCG00001277 ercc3,LOC107660024,LOC107705543,LOC107584836,LOC107677608,LOC107706662 coding upstream 40445 22540350 ~ 22542253 (+)
AMCG00001272 NA coding upstream 131808 22384720 ~ 22450890 (+)
AMCG00001271 NA coding upstream 261525 22302530 ~ 22321173 (+)
AMCG00001265 NA coding upstream 413648 22160391 ~ 22169050 (+)
AMCG00001276 NA coding downstream 1063 22584027 ~ 22607255 (+)
AMCG00001279 NA coding downstream 63149 22646113 ~ 22752856 (+)
AMCG00001284 NA coding downstream 448340 23031304 ~ 23033499 (+)
AMCG00001285 NA coding downstream 517943 23100907 ~ 23119955 (+)
AMCG00001294 ino80d,LOC106582458 coding downstream 1138859 23721823 ~ 23759069 (+)
G130152 NA non-coding upstream 77 22582316 ~ 22582621 (+)
G130125 NA non-coding upstream 255820 22326640 ~ 22326878 (+)
G130090 NA non-coding upstream 377573 22202030 ~ 22205125 (+)
G130014 NA non-coding upstream 631895 21910033 ~ 21950803 (+)
G130010 LOC107575789,LOC100846954 non-coding upstream 716073 21826245 ~ 21866625 (+)
G130144 NA non-coding downstream 32320 22615284 ~ 22616157 (+)
G130160 NA non-coding downstream 41994 22624958 ~ 22625203 (+)
G130166 NA non-coding downstream 216133 22799097 ~ 22805058 (+)
G130346 NA non-coding downstream 631973 23214937 ~ 23217500 (+)
G130348 NA non-coding downstream 641068 23224032 ~ 23224597 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 51862 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 344044 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 590366 21971299 ~ 21992332 (+)
G129913 NA other upstream 1305819 21271384 ~ 21276879 (+)
G129877 NA other upstream 1503828 21077135 ~ 21078870 (+)
G130335 NA other downstream 583299 23166263 ~ 23166656 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other downstream 982187 23565151 ~ 23685121 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 1841601 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 1850829 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 2001215 24584179 ~ 24606472 (+)

Expression



Co-expression Network