G130160


Basic Information

Item Value
gene id G130160
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 22624958 ~ 22625203 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163165
GTGGGATcacatcttcctagtgcacatcaaagacagacatctgctttttgtatcaatcacctcttcacgggaggacagatcgttaacggacccggacctgtatcttctgattggatgaacagccataagatgttacgtcattttcctataaagttgtactcatgtttgtaaacattaagtctcactgaaggaattattcctgacgtggggcttccgagcggctcgattaaagttctgtttgcttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163165 True 246 lncRNA 0.43 1 22624958 22625203

Neighbor

gene id symbol gene type direction distance location
AMCG00001276 NA coding upstream 17703 22584027 ~ 22607255 (+)
AMCG00001275 ercc3,LOC107706662 coding upstream 59338 22551140 ~ 22565620 (+)
AMCG00001277 ercc3,LOC107660024,LOC107705543,LOC107584836,LOC107677608,LOC107706662 coding upstream 82705 22540350 ~ 22542253 (+)
AMCG00001272 NA coding upstream 174068 22384720 ~ 22450890 (+)
AMCG00001271 NA coding upstream 303785 22302530 ~ 22321173 (+)
AMCG00001279 NA coding downstream 20910 22646113 ~ 22752856 (+)
AMCG00001284 NA coding downstream 406101 23031304 ~ 23033499 (+)
AMCG00001285 NA coding downstream 475704 23100907 ~ 23119955 (+)
AMCG00001294 ino80d,LOC106582458 coding downstream 1096620 23721823 ~ 23759069 (+)
AMCG00001300 NA coding downstream 1278125 23903328 ~ 23913809 (+)
G130144 NA non-coding upstream 8801 22615284 ~ 22616157 (+)
G130153 NA non-coding upstream 41994 22582698 ~ 22582964 (+)
G130152 NA non-coding upstream 42337 22582316 ~ 22582621 (+)
G130125 NA non-coding upstream 298080 22326640 ~ 22326878 (+)
G130090 NA non-coding upstream 419833 22202030 ~ 22205125 (+)
G130166 NA non-coding downstream 173894 22799097 ~ 22805058 (+)
G130346 NA non-coding downstream 589734 23214937 ~ 23217500 (+)
G130348 NA non-coding downstream 598829 23224032 ~ 23224597 (+)
G130365 LOC107575789,LOC100846954 non-coding downstream 655608 23280811 ~ 23281334 (+)
G130461 NA non-coding downstream 1103802 23729005 ~ 23729229 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 94122 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 386304 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 632626 21971299 ~ 21992332 (+)
G129913 NA other upstream 1348079 21271384 ~ 21276879 (+)
G129877 NA other upstream 1546088 21077135 ~ 21078870 (+)
G130335 NA other downstream 541060 23166263 ~ 23166656 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other downstream 939948 23565151 ~ 23685121 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 1799362 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 1808590 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 1958976 24584179 ~ 24606472 (+)

Expression


Co-expression Network