G130335


Basic Information

Item Value
gene id G130335
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23166263 ~ 23166656 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163362
attcgggtatattgtcaaaagtgtagaatttaaaacaagggaagtaatgttaagactgtataatgcactagttagacctcatctggaatactgtgtggagctctgggcaccacacttcaagaaggatattgctgctctggaggcagttcagaggagagcaaccagatttattccaggtctgaagggaatgtcctactcagagagactgagggaactgaaccttttcaccctggaacagaggagactatgtggggacttgatccaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaaggcattcaaaacggaaaacaggaga

Function

NR:

description
synaptotagmin-11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163362 True 394 TUCP 0.45 1 23166263 23166656

Neighbor

gene id symbol gene type direction distance location
AMCG00001285 NA coding upstream 46308 23100907 ~ 23119955 (+)
AMCG00001284 NA coding upstream 132764 23031304 ~ 23033499 (+)
AMCG00001279 NA coding upstream 413407 22646113 ~ 22752856 (+)
AMCG00001276 NA coding upstream 559008 22584027 ~ 22607255 (+)
AMCG00001275 ercc3,LOC107706662 coding upstream 600643 22551140 ~ 22565620 (+)
AMCG00001294 ino80d,LOC106582458 coding downstream 555167 23721823 ~ 23759069 (+)
AMCG00001300 NA coding downstream 736672 23903328 ~ 23913809 (+)
AMCG00001298 NA coding downstream 781793 23948449 ~ 23990082 (+)
AMCG00001297 tmem198a coding downstream 905773 24072429 ~ 24090849 (+)
AMCG00001299 dnpep,LOC106573845 coding downstream 1013594 24180250 ~ 24207621 (+)
G130166 NA non-coding upstream 361205 22799097 ~ 22805058 (+)
G130160 NA non-coding upstream 541060 22624958 ~ 22625203 (+)
G130144 NA non-coding upstream 550106 22615284 ~ 22616157 (+)
G130153 NA non-coding upstream 583299 22582698 ~ 22582964 (+)
G130152 NA non-coding upstream 583642 22582316 ~ 22582621 (+)
G130346 NA non-coding downstream 48281 23214937 ~ 23217500 (+)
G130348 NA non-coding downstream 57376 23224032 ~ 23224597 (+)
G130365 LOC107575789,LOC100846954 non-coding downstream 114155 23280811 ~ 23281334 (+)
G130461 NA non-coding downstream 562349 23729005 ~ 23729229 (+)
G130492 NA non-coding downstream 689064 23855720 ~ 23856116 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 635427 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 927609 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 1173931 21971299 ~ 21992332 (+)
G129913 NA other upstream 1889384 21271384 ~ 21276879 (+)
G129877 NA other upstream 2087393 21077135 ~ 21078870 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other downstream 398495 23565151 ~ 23685121 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 1257909 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 1267137 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 1417523 24584179 ~ 24606472 (+)
AMCG00001331 NA other downstream 2257031 25423687 ~ 25450310 (+)

Expression


Co-expression Network