G130346


Basic Information

Item Value
gene id G130346
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23214937 ~ 23217500 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163374
CTAACATTTACTTGGAGAAGGAGAAAGTCGGAAGACAGCATCTGTGAAGACTGACGCTTTTCATGGATCTTGACACAATAGAAGGCCTTAATGAAGTTCAACATGCAGTGTACAGAACGGCCTTCAAACTGCACTCCCTGCAGAAACTGTGCCAGTTGAATTTGGTGGATCTATTGCTGCTGAGTCCTGTCCTGCAAGATTTAAGGAGGAAGCTCGGAGATGACTGCAGGGTGTCTGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163374 True 240 lncRNA 0.46 4 23214937 23217500

Neighbor

gene id symbol gene type direction distance location
AMCG00001285 NA coding upstream 94982 23100907 ~ 23119955 (+)
AMCG00001284 NA coding upstream 181438 23031304 ~ 23033499 (+)
AMCG00001279 NA coding upstream 462081 22646113 ~ 22752856 (+)
AMCG00001276 NA coding upstream 607682 22584027 ~ 22607255 (+)
AMCG00001275 ercc3,LOC107706662 coding upstream 649317 22551140 ~ 22565620 (+)
AMCG00001294 ino80d,LOC106582458 coding downstream 504323 23721823 ~ 23759069 (+)
AMCG00001300 NA coding downstream 685828 23903328 ~ 23913809 (+)
AMCG00001298 NA coding downstream 730949 23948449 ~ 23990082 (+)
AMCG00001297 tmem198a coding downstream 854929 24072429 ~ 24090849 (+)
AMCG00001299 dnpep,LOC106573845 coding downstream 962750 24180250 ~ 24207621 (+)
G130166 NA non-coding upstream 409879 22799097 ~ 22805058 (+)
G130160 NA non-coding upstream 589734 22624958 ~ 22625203 (+)
G130144 NA non-coding upstream 598780 22615284 ~ 22616157 (+)
G130153 NA non-coding upstream 631973 22582698 ~ 22582964 (+)
G130152 NA non-coding upstream 632316 22582316 ~ 22582621 (+)
G130348 NA non-coding downstream 6532 23224032 ~ 23224597 (+)
G130365 LOC107575789,LOC100846954 non-coding downstream 63311 23280811 ~ 23281334 (+)
G130461 NA non-coding downstream 511505 23729005 ~ 23729229 (+)
G130492 NA non-coding downstream 638220 23855720 ~ 23856116 (+)
G130531 NA non-coding downstream 705711 23923211 ~ 23923877 (+)
G130335 NA other upstream 48281 23166263 ~ 23166656 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 684101 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 976283 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 1222605 21971299 ~ 21992332 (+)
G129913 NA other upstream 1938058 21271384 ~ 21276879 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other downstream 347651 23565151 ~ 23685121 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 1207065 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 1216293 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 1366679 24584179 ~ 24606472 (+)
AMCG00001331 NA other downstream 2206187 25423687 ~ 25450310 (+)

Expression


Co-expression Network