G130461


Basic Information

Item Value
gene id G130461
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23729005 ~ 23729229 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163512
tccctagtttaaaagattctcaattactctgcactcTCCCAGTGTGTTACCagtgaccagtggattcccccccagctttggccagtagcctgtctactagtttagggagatctgcaacctgagcaccaggcaggcaagataccatgcgggtctccttatcactgaAACACACTAACGCCTGATCTATGCCTCTGtgaatcgagtctcctactataactacctccc

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: interleukin enhancer-binding factor 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163512 True 225 lncRNA 0.49 1 23729005 23729229

Neighbor

gene id symbol gene type direction distance location
AMCG00001285 NA coding upstream 609050 23100907 ~ 23119955 (+)
AMCG00001284 NA coding upstream 695506 23031304 ~ 23033499 (+)
AMCG00001279 NA coding upstream 976149 22646113 ~ 22752856 (+)
AMCG00001276 NA coding upstream 1121750 22584027 ~ 22607255 (+)
AMCG00001275 ercc3,LOC107706662 coding upstream 1163385 22551140 ~ 22565620 (+)
AMCG00001300 NA coding downstream 174099 23903328 ~ 23913809 (+)
AMCG00001298 NA coding downstream 219220 23948449 ~ 23990082 (+)
AMCG00001297 tmem198a coding downstream 343200 24072429 ~ 24090849 (+)
AMCG00001299 dnpep,LOC106573845 coding downstream 451021 24180250 ~ 24207621 (+)
AMCG00001309 NA coding downstream 527607 24256836 ~ 24286635 (+)
G130365 LOC107575789,LOC100846954 non-coding upstream 447671 23280811 ~ 23281334 (+)
G130348 NA non-coding upstream 504408 23224032 ~ 23224597 (+)
G130346 NA non-coding upstream 511505 23214937 ~ 23217500 (+)
G130166 NA non-coding upstream 923947 22799097 ~ 22805058 (+)
G130160 NA non-coding upstream 1103802 22624958 ~ 22625203 (+)
G130492 NA non-coding downstream 126491 23855720 ~ 23856116 (+)
G130531 NA non-coding downstream 193982 23923211 ~ 23923877 (+)
G130530 NA non-coding downstream 195649 23924878 ~ 23926011 (+)
G130552 NA non-coding downstream 323593 24052822 ~ 24120461 (+)
G130648 NA non-coding downstream 1021890 24751119 ~ 24751414 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 43884 23565151 ~ 23685121 (+)
G130335 NA other upstream 562349 23166263 ~ 23166656 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 1198169 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 1490351 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 1736673 21971299 ~ 21992332 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 695336 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 704564 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 854950 24584179 ~ 24606472 (+)
AMCG00001331 NA other downstream 1694458 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 2006326 25735555 ~ 25749501 (+)

Expression


Co-expression Network