Gene
RNA
| Item | Value |
|---|---|
| gene id | G130492 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 23855720 ~ 23856116 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU163544 | True | 397 | lncRNA | 0.37 | 1 | 23855720 | 23856116 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001294 | ino80d,LOC106582458 | coding | upstream | 96651 | 23721823 ~ 23759069 (+) |
| AMCG00001285 | NA | coding | upstream | 735765 | 23100907 ~ 23119955 (+) |
| AMCG00001284 | NA | coding | upstream | 822221 | 23031304 ~ 23033499 (+) |
| AMCG00001279 | NA | coding | upstream | 1102864 | 22646113 ~ 22752856 (+) |
| AMCG00001276 | NA | coding | upstream | 1248465 | 22584027 ~ 22607255 (+) |
| AMCG00001300 | NA | coding | downstream | 47212 | 23903328 ~ 23913809 (+) |
| AMCG00001298 | NA | coding | downstream | 92333 | 23948449 ~ 23990082 (+) |
| AMCG00001297 | tmem198a | coding | downstream | 216313 | 24072429 ~ 24090849 (+) |
| AMCG00001299 | dnpep,LOC106573845 | coding | downstream | 324134 | 24180250 ~ 24207621 (+) |
| AMCG00001309 | NA | coding | downstream | 400720 | 24256836 ~ 24286635 (+) |
| G130461 | NA | non-coding | upstream | 126491 | 23729005 ~ 23729229 (+) |
| G130365 | LOC107575789,LOC100846954 | non-coding | upstream | 574386 | 23280811 ~ 23281334 (+) |
| G130348 | NA | non-coding | upstream | 631123 | 23224032 ~ 23224597 (+) |
| G130346 | NA | non-coding | upstream | 638220 | 23214937 ~ 23217500 (+) |
| G130166 | NA | non-coding | upstream | 1050662 | 22799097 ~ 22805058 (+) |
| G130531 | NA | non-coding | downstream | 67095 | 23923211 ~ 23923877 (+) |
| G130530 | NA | non-coding | downstream | 68762 | 23924878 ~ 23926011 (+) |
| G130552 | NA | non-coding | downstream | 196706 | 24052822 ~ 24120461 (+) |
| G130648 | NA | non-coding | downstream | 895003 | 24751119 ~ 24751414 (+) |
| G130684 | NA | non-coding | downstream | 1166563 | 25022679 ~ 25023049 (+) |
| AMCG00001292 | ndufs1,LOC107555450,LOC107748553 | other | upstream | 170599 | 23565151 ~ 23685121 (+) |
| G130335 | NA | other | upstream | 689064 | 23166263 ~ 23166656 (+) |
| AMCG00001278 | ercc3,LOC107706662 | other | upstream | 1324884 | 22500035 ~ 22530836 (+) |
| AMCG00001269 | trak2,LOC107582328,LOC106573853 | other | upstream | 1617066 | 22189908 ~ 22238654 (+) |
| AMCG00001260 | NA | other | upstream | 1863388 | 21971299 ~ 21992332 (+) |
| AMCG00001312 | tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 | other | downstream | 568449 | 24424565 ~ 24446233 (+) |
| G130616 | si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 | other | downstream | 577677 | 24433793 ~ 24454385 (+) |
| AMCG00001315 | NA | other | downstream | 728063 | 24584179 ~ 24606472 (+) |
| AMCG00001331 | NA | other | downstream | 1567571 | 25423687 ~ 25450310 (+) |
| AMCG00001337 | sumo1 | other | downstream | 1879439 | 25735555 ~ 25749501 (+) |
