G130531


Basic Information

Item Value
gene id G130531
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23923211 ~ 23923877 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163591
CACAGAGTGTACAGCCAAACTTATAATTGAGTTATCTAAGATAAACAACATCTGGAATAGAGGGGCCAATTGGATTGCCAGAAAAAGTCATCACCATCTGCTTTATATATAAGGCTGTaactaaaacatttgaaaacatttgctCTGCAGTTGCTTCAGTACACTTTGTATGCTGGACTCAGgAGGGACAGGACAATGGCTGCACTTATACTTCTGCTTATTGCAAAGGTATGCTATGCCATGTGGGTACTTCTCAGCAATCATCCATTGGTTTCAGCAGGGATGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163591 True 287 lncRNA 0.40 3 23923211 23923877

Neighbor

gene id symbol gene type direction distance location
AMCG00001300 NA coding upstream 9402 23903328 ~ 23913809 (+)
AMCG00001294 ino80d,LOC106582458 coding upstream 164142 23721823 ~ 23759069 (+)
AMCG00001285 NA coding upstream 803256 23100907 ~ 23119955 (+)
AMCG00001284 NA coding upstream 889712 23031304 ~ 23033499 (+)
AMCG00001279 NA coding upstream 1170355 22646113 ~ 22752856 (+)
AMCG00001298 NA coding downstream 24572 23948449 ~ 23990082 (+)
AMCG00001297 tmem198a coding downstream 148552 24072429 ~ 24090849 (+)
AMCG00001299 dnpep,LOC106573845 coding downstream 256373 24180250 ~ 24207621 (+)
AMCG00001309 NA coding downstream 332959 24256836 ~ 24286635 (+)
AMCG00001302 ptprn,ptprnb,LOC107748541 coding downstream 398794 24322671 ~ 24351647 (+)
G130492 NA non-coding upstream 67095 23855720 ~ 23856116 (+)
G130461 NA non-coding upstream 193982 23729005 ~ 23729229 (+)
G130365 LOC107575789,LOC100846954 non-coding upstream 641877 23280811 ~ 23281334 (+)
G130348 NA non-coding upstream 698614 23224032 ~ 23224597 (+)
G130346 NA non-coding upstream 705711 23214937 ~ 23217500 (+)
G130530 NA non-coding downstream 1001 23924878 ~ 23926011 (+)
G130552 NA non-coding downstream 128945 24052822 ~ 24120461 (+)
G130648 NA non-coding downstream 827242 24751119 ~ 24751414 (+)
G130684 NA non-coding downstream 1098802 25022679 ~ 25023049 (+)
G130689 NA non-coding downstream 1132744 25056621 ~ 25056978 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 238090 23565151 ~ 23685121 (+)
G130335 NA other upstream 756555 23166263 ~ 23166656 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 1392375 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 1684557 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 1930879 21971299 ~ 21992332 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 500688 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 509916 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 660302 24584179 ~ 24606472 (+)
AMCG00001331 NA other downstream 1499810 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 1811678 25735555 ~ 25749501 (+)

Expression


Co-expression Network