G130648


Basic Information

Item Value
gene id G130648
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24751119 ~ 24751414 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163746
CTcttcaacaaatcaaacatgTGTGAACCTTTGATCagttgtcctttaaaaacaaattcaccctgTTCATTCCAAGCCGTTACCCGCGGTTTCTGAACCATTTTGTGCAGGATATATTCCGCATGTCTTTTGCTTCTGGCAggcatgtttctcaaaacatcAGTTACAACATCTCTCTCTGAACTCTCAACAGGGTCGGTCACCGCAACATCTTTATCAACTGTAGCCCCCGCATCAGCCCCAGAACCATTTTCTTGAGAGGCCATGGTTAAAGTTAAAGTGTTTTGATCTTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163746 True 296 lncRNA 0.43 1 24751119 24751414

Neighbor

gene id symbol gene type direction distance location
AMCG00001317 NA coding upstream 91190 24645852 ~ 24659929 (+)
AMCG00001314 NA coding upstream 174748 24568365 ~ 24576371 (+)
AMCG00001310 stk16,LOC107676064,LOC107674016,LOC107750071,LOC107750290 coding upstream 248744 24496658 ~ 24502375 (+)
AMCG00001311 tuba8l2,LOC108411703,LOC103042625,LOC107750365 coding upstream 260483 24480969 ~ 24490636 (+)
AMCG00001313 si:ch211-114n24.6,LOC106598125,LOC107581392,LOC107659949,LOC108433351,LOC103467923,LOC102313992,LOC104949664,LOC106573846 coding upstream 295990 24447621 ~ 24455129 (+)
AMCG00001322 NA coding downstream 278489 25029903 ~ 25044812 (+)
AMCG00001324 NA coding downstream 368222 25119636 ~ 25146056 (+)
AMCG00001329 NA coding downstream 398883 25150297 ~ 25150756 (+)
AMCG00001330 NA coding downstream 399350 25150764 ~ 25164833 (+)
AMCG00001325 NA coding downstream 494962 25246376 ~ 25296858 (+)
G130552 NA non-coding upstream 630658 24052822 ~ 24120461 (+)
G130530 NA non-coding upstream 825108 23924878 ~ 23926011 (+)
G130531 NA non-coding upstream 827242 23923211 ~ 23923877 (+)
G130492 NA non-coding upstream 895003 23855720 ~ 23856116 (+)
G130461 NA non-coding upstream 1021890 23729005 ~ 23729229 (+)
G130684 NA non-coding downstream 271265 25022679 ~ 25023049 (+)
G130689 NA non-coding downstream 305207 25056621 ~ 25056978 (+)
G130692 NA non-coding downstream 335247 25086661 ~ 25086898 (+)
G130695 NA non-coding downstream 372180 25123594 ~ 25126079 (+)
G130705 NA non-coding downstream 444968 25196382 ~ 25196991 (+)
AMCG00001315 NA other upstream 144647 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 296734 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 304886 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1065998 23565151 ~ 23685121 (+)
G130335 NA other upstream 1584463 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 672273 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 984141 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 2105185 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 2152949 26904363 ~ 26954597 (+)

Expression


Co-expression Network