G130689


Basic Information

Item Value
gene id G130689
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25056621 ~ 25056978 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163792
ttagttgcaatgcctttaatacacgcagcgtggagaggaacagtcaatcaagaagatcccaaagtcgctctgccttcatttaaaagtcagaggcttttatacacaaaaaacaaagatctggttacaatcacagtcattactatattatcttagagagttagctaagcagaatatatcattataagacagagttcataggtcaacacatggattagggagcaggcacttcaatcatactgtttgacattgtctccaagattctcatcgtaaataacaaacagaaaacaagctaccttctggcttgaccttatctttcttaagtatacaagagagtagAATAGATATGAGGGAAAGAATt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163792 True 358 lncRNA 0.36 1 25056621 25056978

Neighbor

gene id symbol gene type direction distance location
AMCG00001322 NA coding upstream 11809 25029903 ~ 25044812 (+)
AMCG00001319 NA coding upstream 194916 24702643 ~ 24861705 (+)
AMCG00001317 NA coding upstream 396692 24645852 ~ 24659929 (+)
AMCG00001314 NA coding upstream 480250 24568365 ~ 24576371 (+)
AMCG00001310 stk16,LOC107676064,LOC107674016,LOC107750071,LOC107750290 coding upstream 554246 24496658 ~ 24502375 (+)
AMCG00001324 NA coding downstream 62658 25119636 ~ 25146056 (+)
AMCG00001329 NA coding downstream 93319 25150297 ~ 25150756 (+)
AMCG00001330 NA coding downstream 93786 25150764 ~ 25164833 (+)
AMCG00001325 NA coding downstream 189398 25246376 ~ 25296858 (+)
AMCG00001328 NA coding downstream 242118 25299096 ~ 25302688 (+)
G130684 NA non-coding upstream 33572 25022679 ~ 25023049 (+)
G130648 NA non-coding upstream 305207 24751119 ~ 24751414 (+)
G130552 NA non-coding upstream 936160 24052822 ~ 24120461 (+)
G130530 NA non-coding upstream 1130610 23924878 ~ 23926011 (+)
G130531 NA non-coding upstream 1132744 23923211 ~ 23923877 (+)
G130692 NA non-coding downstream 29683 25086661 ~ 25086898 (+)
G130695 NA non-coding downstream 66616 25123594 ~ 25126079 (+)
G130705 NA non-coding downstream 139404 25196382 ~ 25196991 (+)
G130711 NA non-coding downstream 158247 25215225 ~ 25215735 (+)
G130712 NA non-coding downstream 158960 25215938 ~ 25217050 (+)
AMCG00001315 NA other upstream 450149 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 602236 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 610388 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1371500 23565151 ~ 23685121 (+)
G130335 NA other upstream 1889965 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 366709 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 678577 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1799621 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1847385 26904363 ~ 26954597 (+)

Expression


Co-expression Network