G130692


Basic Information

Item Value
gene id G130692
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25086661 ~ 25086898 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163795
ttgaGGAATCTCTGCTTGAAGATGCCATCCTCACTCTAATAGCTCACAagtttggtgatttgtatgataCTGGTAATCCTAATGTGACATTGCTAGTTGAGGatattgtgaaaacagtggATGCCCTCCCCAACATGCTcaagagaatgctgtataaaGATCCACGGCCTGGTGTACCTGCTTTTACAGCTGTTCAAAAAGTTCTCCAGAGTTCTTTTGCAAACACCATCCCTATCAT

Function

GO:

id name namespace
GO:0072329 monocarboxylic acid catabolic process biological_process
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0009062 fatty acid catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163795 True 238 lncRNA 0.42 1 25086661 25086898

Neighbor

gene id symbol gene type direction distance location
AMCG00001322 NA coding upstream 41849 25029903 ~ 25044812 (+)
AMCG00001319 NA coding upstream 224956 24702643 ~ 24861705 (+)
AMCG00001317 NA coding upstream 426732 24645852 ~ 24659929 (+)
AMCG00001314 NA coding upstream 510290 24568365 ~ 24576371 (+)
AMCG00001310 stk16,LOC107676064,LOC107674016,LOC107750071,LOC107750290 coding upstream 584286 24496658 ~ 24502375 (+)
AMCG00001324 NA coding downstream 32738 25119636 ~ 25146056 (+)
AMCG00001329 NA coding downstream 63399 25150297 ~ 25150756 (+)
AMCG00001330 NA coding downstream 63866 25150764 ~ 25164833 (+)
AMCG00001325 NA coding downstream 159478 25246376 ~ 25296858 (+)
AMCG00001328 NA coding downstream 212198 25299096 ~ 25302688 (+)
G130689 NA non-coding upstream 29683 25056621 ~ 25056978 (+)
G130684 NA non-coding upstream 63612 25022679 ~ 25023049 (+)
G130648 NA non-coding upstream 335247 24751119 ~ 24751414 (+)
G130552 NA non-coding upstream 966200 24052822 ~ 24120461 (+)
G130530 NA non-coding upstream 1160650 23924878 ~ 23926011 (+)
G130695 NA non-coding downstream 36696 25123594 ~ 25126079 (+)
G130705 NA non-coding downstream 109484 25196382 ~ 25196991 (+)
G130711 NA non-coding downstream 128327 25215225 ~ 25215735 (+)
G130712 NA non-coding downstream 129040 25215938 ~ 25217050 (+)
G130715 NA non-coding downstream 134718 25221616 ~ 25246154 (+)
AMCG00001315 NA other upstream 480189 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 632276 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 640428 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1401540 23565151 ~ 23685121 (+)
G130335 NA other upstream 1920005 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 336789 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 648657 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1769701 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1817465 26904363 ~ 26954597 (+)

Expression


Co-expression Network