G130705


Basic Information

Item Value
gene id G130705
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25196382 ~ 25196991 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163808
aatggttagctttgaggcattcttacaacaaaacaaggatcaagtctaaaacaatggtctacaattttagaaaagcaaaccttgatggtatgaggcggcacttagaggtagactggagcacactggatacagattcagttgaaaatggatggttatattttaagaatatactacttgaggctcaggagaaatttgtaccaaaacttagcaaattgaggaccaaaaaacattggccaaaatggtttaatagaggtatgcaaaaaaatatcttgagaaacaaaatgttgtatagcgcatacaaaaggaatagatgaaacaaaatacatagaatatgttgagctgcaaagagaccttaagaaaggaatcgggaaagcaaagagggaaatagaaagaaacctagctcttggagctaaagctaatgcaaacagcttttttcaatactacaacagcaagaggtcaataaaggatgaagtgaaacagataaagggcaaaaatggaagtatgtTGGAAAATGAAGATGTGgcaatgttctaaatgagtatttcacacaggtttttacaaaataaaaaattgataacatgccacaggttaacaatcaacccagtcaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163808 True 610 lncRNA 0.35 1 25196382 25196991

Neighbor

gene id symbol gene type direction distance location
AMCG00001330 NA coding upstream 31549 25150764 ~ 25164833 (+)
AMCG00001329 NA coding upstream 45626 25150297 ~ 25150756 (+)
AMCG00001324 NA coding upstream 50326 25119636 ~ 25146056 (+)
AMCG00001322 NA coding upstream 151570 25029903 ~ 25044812 (+)
AMCG00001319 NA coding upstream 334677 24702643 ~ 24861705 (+)
AMCG00001325 NA coding downstream 49385 25246376 ~ 25296858 (+)
AMCG00001328 NA coding downstream 102105 25299096 ~ 25302688 (+)
AMCG00001332 NA coding downstream 166902 25363893 ~ 25365296 (+)
AMCG00001334 NA coding downstream 355453 25552444 ~ 25581376 (+)
AMCG00001335 NA coding downstream 433056 25630047 ~ 25636339 (+)
G130695 NA non-coding upstream 70303 25123594 ~ 25126079 (+)
G130692 NA non-coding upstream 109484 25086661 ~ 25086898 (+)
G130689 NA non-coding upstream 139404 25056621 ~ 25056978 (+)
G130684 NA non-coding upstream 173333 25022679 ~ 25023049 (+)
G130648 NA non-coding upstream 444968 24751119 ~ 24751414 (+)
G130711 NA non-coding downstream 18234 25215225 ~ 25215735 (+)
G130712 NA non-coding downstream 18947 25215938 ~ 25217050 (+)
G130715 NA non-coding downstream 24625 25221616 ~ 25246154 (+)
G130757 NA non-coding downstream 185188 25382179 ~ 25397634 (+)
G130773 NA non-coding downstream 253525 25450516 ~ 25450858 (+)
AMCG00001315 NA other upstream 589910 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 741997 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 750149 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1511261 23565151 ~ 23685121 (+)
G130335 NA other upstream 2029726 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 226696 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 538564 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1659608 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1707372 26904363 ~ 26954597 (+)

Expression


Co-expression Network