G130789


Basic Information

Item Value
gene id G130789
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25582342 ~ 25582606 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU163913
CCCATCCCATGCAATCCCTAACACTGCCAGGCTTTGCTTCTCAATTCCTTCCACCAAGCAagttgcttctctcttccaTTGGGATGAAGGACAGAGCAGAGGAAGGAGAAGGTACACCTATGCCAGCAGAAGAGAAGATCATATGAGGGACAGCAAGAATAGAGGACTGATGATAGGTAGGAAGGggcaaaatgtacaaaagtaTCTATATGCAAAGATGAACCTTAGAATGCAAATAAGAGAACATTGATATGAACTCCTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163913 True 265 lncRNA 0.43 1 25582342 25582606

Neighbor

gene id symbol gene type direction distance location
AMCG00001334 NA coding upstream 966 25552444 ~ 25581376 (+)
AMCG00001332 NA coding upstream 217046 25363893 ~ 25365296 (+)
AMCG00001328 NA coding upstream 279654 25299096 ~ 25302688 (+)
AMCG00001325 NA coding upstream 285484 25246376 ~ 25296858 (+)
AMCG00001330 NA coding upstream 417509 25150764 ~ 25164833 (+)
AMCG00001335 NA coding downstream 47441 25630047 ~ 25636339 (+)
AMCG00001333 NA coding downstream 81259 25663865 ~ 25673767 (+)
AMCG00001338 NA coding downstream 136298 25718904 ~ 25725679 (+)
AMCG00001348 als2,LOC106574246 coding downstream 439375 26021981 ~ 26069510 (+)
AMCG00001350 NA coding downstream 492964 26075570 ~ 26097013 (+)
G130773 NA non-coding upstream 131484 25450516 ~ 25450858 (+)
G130757 NA non-coding upstream 184708 25382179 ~ 25397634 (+)
G130715 NA non-coding upstream 336188 25221616 ~ 25246154 (+)
G130712 NA non-coding upstream 365292 25215938 ~ 25217050 (+)
G130711 NA non-coding upstream 366607 25215225 ~ 25215735 (+)
G130792 NA non-coding downstream 50628 25633234 ~ 25633576 (+)
G130817 NA non-coding downstream 92611 25675217 ~ 25675482 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding downstream 145247 25727853 ~ 25729837 (+)
G130884 NA non-coding downstream 478542 26061148 ~ 26062693 (+)
G130948 NA non-coding downstream 714101 26296707 ~ 26335290 (+)
AMCG00001331 NA other upstream 132032 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 975870 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 1127957 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 1136109 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1897221 23565151 ~ 23685121 (+)
AMCG00001337 sumo1 other downstream 152949 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1273993 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1321757 26904363 ~ 26954597 (+)

Expression


Co-expression Network