AMCG00002265


Basic Information

Item Value
gene id AMCG00002265
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 9608750 ~ 9620127 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002265
ATGCCCTCCACTAAGCGGACGCCTCGCATACACTGCGACACGGGGCTCCGGCCGCAGGCCCCGGGAAACTGCGCCGCCACGGTGGAGAGCAACACGGTGCCGTCGTCCTCGGAGGGGATCTCCATCGGCTCCTCATTCTCATCCTCCGCTACTCGGATATACAGCTCTGCCATTTTTCTTCTAAAACAGTACCAGTACGTCTGTGCCAGTAGCATGAATAAGCACAGCTTCATGAGcTTCTGTCCCATGTTCACTAGGGGGCGCCCTCTGCAGCTTCAGAAGAGAGAGTGGTTCAGTGAAACAGTACAAAGCGTAGCAGAGGGAGATGTGGAATGCTTCACAGAATACATGGACCTCTGGGTGCAGCGGAGCAGAATTGAGGGTCTGAGACTGTGGCTTTCTGGAGCTCTAAGAATTCCAGCCAGCCTGGCTTCCCTGGAAAGTCTGAACCTGCAGCTGTCGGCCTGTGGGTACTCCCTCCACAGAGACCCAGACAGGAACTACATCTTCAGGGTAATGTACAGCGGATGCTTTGTGCAGCTAGAGCGTGGCAACTACATCCTGTTGCTAAATCTGATGAAGAGATTGGGCAGGTTTGGAGGCCGAAGTCACAATTTTGTCATGAAATGTCCACTTGTAACAGTACCACCTGGTGGGGAGCATGTTTATTGCACCCCTGATTACATACAAATACGCTGGTCTTTGGCGCTAAGAGGGGAACTGGTGGTGGCACTGGAAGACTCCAGCTTAATCCAATTGAGGGTTGAATCCAGTGGATCTAACATTTCTGTCCAGGGCAGGAGGAATGATGCGCTGAACTCTGTGGAGATCATGGGAAGGACCATTGATATCTTGCCTCTGTCGCTTGTTAGTGGATACTATGCCTACAGCATGGAGGCCAGTTGCCCTAATGTGTCTAGTTCCCCAGCAGAGGAGACAGTGTTACACATCTCAAAACGCAGAATGGGATTAATTAAGAGAGGAGGCTATGACAAAGACAGCTTGACTGTGAATACTGTACTTgtgaagcaaacaaacagcttCTCAGTGTTAGAGAACAAAGAGTATCTTCAAATCAGTATCCCCACAGCTCACATCCTTCAAGAAAAGAACTGCACAGATCCTCCAGGTGAATTGTTTTTGCAGCCGTTCTTCAAAGTGGATGTAATTGTGACTTTCAAAGAAATGCCCTATAGATTCCCCTGGAGTATAGAGAATGTGTTTCCATGTGTTGAGTCTCAATCCACAAGCCCATCCTCTGTAGCAGTGACCCCAGCACAAGAGCACAAGAGCACAACAGCTAATCTCTACGACACAATTAGCACTGCTTCTGCTGCAGCCCGTGTCGGGTCCACTTTGGATCCAAGGGGACCTACAGATTCAAGTCTGTACAGCAAAGACGCTCGAGCCAGGGAGTCCTCTTCTCCCTCTGCAGAGATGGCCTTGGCTGCTGATCGAGGGGCCCGAGCAGCAAACCCTACACCTTCCCCCAGGGAGCTGCAGCCAAGTGAAGCTTCCACCGAGGGCCAGGAGAGTTCAACATCCGTGATAGCAGAGTGGAAAACGTCGGCAGAACAAGTGACATCCACAGGTGCTCGAGTAGATCCGTCACTTGCATTACCTACAGCCGTGAAGGTTGCTTGGTCTTTGCCAGAGCTGGAACACAACCCATCGTGGCCCTCACCTCTGCTGCTCACCTCTGCCTCCCAACCAACCTCCTCCGATGTTCTGGTTCGCACTGAAAGTGGGGAGTATTCAACAGAGCCTCACCCCACAGGTTCAGAGACTTCGATCCCATACGGAGATGACCCAGTCTTGCTGACAACCTCACCCCATGTGGGCTCTAAACAATTGCAGGAAGAAAAGCGTGGAGGTGGAAAGCTCTCCTCAAATTGCTCAGAAGACGAGAGTGGTTCACCCACAGGACTTCAGTCTTCTGCGCGAGTTGAAGAAAGAGTAGTGGAGGGCAATGAAAATCATCAAATCTCATCACCATGTGGCATGGCACCTCCCCGCATCTCAGACCTCACATCGTTTAATGCGACGAAGTCTCCGCGTTTCTGGGAGGATAACACAAGTGTTGAAGAAGATGGCAGCTGGACGACAACGCAGCCAGCACCCAGCACTAATAAATCGCCACCACTCATGGCCTCCACTTCGAATAATGAAACAACGGCTGCAGTCACTCTACTGCTGTACCGGTTTATTgctggagagacagagatgggggACATACCTTCCGAGCCATCACCCCACGGCAACGCAGAACAAGACAGCACTGACAACAAACAGATGCAGGCAACCGCTGCTCTGCCAGGGACCGCCCTGGGGCAGAGATTATCTACCACCAGTTTAGCGGACACGTCGGAATTCCAAACATCTTCAAGCGGGACGACGTCAGCAAACAGGATATCTGTAGATGTCACTGCAGCCATGCAACACAGCAGCTTCAGCAGCGCACCGTGGGGCTCTCTTCCAGGGCAGAATGGGACTGACAGCCCAGCCCAGGAAACAGGGGCCTCATTTCCAACAGCTACAACTGATCACTGGGCCTGA
>TU153015
AGTGGATCTAACATTTCTGTCCAGGGCAGGAGGAATGATGCGCTGAACTCTGTGGAGATCATGGGAAGGACCATTGATATCTTGCCTCTGTCGCTTGTTAGTGGATACTATGCCTACAGCATGGAGGCCAGTTGCCCTAATGTGTCTAGTTCCCCAGCAGAGGAGACAGTGTTACACATCTCAAAACGCAGAATGGGATTAATTAAGAGAGGAGGCTATGACAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002265 True 2556 mRNA 0.52 12 9608750 9620127
TU153015 False 226 lncRNA 0.47 3 9612062 9614287

Neighbor

gene id symbol gene type direction distance location
AMCG00002263 NA coding downstream 251780 9309416 ~ 9356970 (-)
AMCG00002259 NA coding downstream 400051 9200586 ~ 9208699 (-)
AMCG00002260 NA coding downstream 415321 9193199 ~ 9193429 (-)
AMCG00002250 NA coding downstream 547655 9055314 ~ 9061095 (-)
AMCG00002248 ubiad1 coding downstream 586479 9018607 ~ 9022271 (-)
AMCG00002271 NA coding upstream 8523 9628650 ~ 9629679 (-)
AMCG00002267 NA coding upstream 10003 9630130 ~ 9637266 (-)
AMCG00002270 pgd,LOC107716232,LOC107681986 coding upstream 23119 9643246 ~ 9650610 (-)
AMCG00002269 kif1b coding upstream 41381 9661508 ~ 9692975 (-)
AMCG00002268 NA coding upstream 73633 9693760 ~ 9725266 (-)
G122037 NA non-coding downstream 321163 9283969 ~ 9287587 (-)
G122019 NA non-coding downstream 395321 9138447 ~ 9213429 (-)
G121935 NA non-coding downstream 590423 9018126 ~ 9018327 (-)
G121912 NA non-coding downstream 675587 8932163 ~ 8933163 (-)
G121885 NA non-coding downstream 738052 8868645 ~ 8870698 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding upstream 901 9621028 ~ 9621472 (-)
G122131 NA non-coding upstream 228108 9848235 ~ 9851376 (-)
G122226 NA non-coding upstream 603086 10223213 ~ 10224982 (-)
G122302 NA non-coding upstream 1130284 10750411 ~ 10750781 (-)
G122319 NA non-coding upstream 1192059 10812186 ~ 10813876 (-)
AMCG00002223 NA other downstream 1769339 7826641 ~ 7839411 (-)
AMCG00002167 NA other downstream 3593357 5975725 ~ 6015393 (-)
G120993 NA other downstream 5388873 4214715 ~ 4219877 (-)
G120927 slc45a1,LOC107756616,LOC106565711,LOC107702000 other downstream 5822206 3784236 ~ 3786544 (-)
G120907 NA other downstream 5892498 3713867 ~ 3716252 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other upstream 137298 9757425 ~ 9801108 (-)
AMCG00002276 NA other upstream 210392 9830519 ~ 9833224 (-)
AMCG00002279 NA other upstream 216791 9836918 ~ 9853075 (-)
AMCG00002288 NA other upstream 649762 10269889 ~ 10279984 (-)
AMCG00002301 NA other upstream 1217677 10837804 ~ 10847201 (-)

Expression


Co-expression Network