AMCG00002284


Basic Information

Item Value
gene id AMCG00002284
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 10240092 ~ 10244785 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002284
AGTTGTGTGgctttttataaatacataaaagtccACCGCTGATCCAGTGCACTGAGACAGGGAAACGGGGCACGATGCATATTTTACAATCCGCCAAAAACCTTGTTGCACTGAAAAGCATGCTTCACAGGGAGCTTCCTCAGTCAATGTCAGTTTACGGTGGACTTCTGCACATAATGAACAATAACCGCTGCCACCTTGAGATGTGTGTGGACTCTTGGCCCGACTTCAGCACTGTCATTTGTCGACGTCAGAAACAGGATGTCGCCAGTATGAGGACGATGCTGATGGACGACCGAGTAATCAGCTGGAAAAAGGAGATAATCATGTCTGCTATCCCAAGCTATTGCAGTGGTGTCATACAAGAGATCGCCAGCAGCAATGGCATGGAAGTGGAAAAGAATGTTCCCCTCAACCTCTGTATTCAAAACAATCCAAAGTATATGGAGTATGGGGGGAGTGAATTGGCATCAAAGATTTCCAGTCTGAATGTCTCCCATGCTGAACTGGTGTGCAGCCACTTGGCCTTCGGTGGGAATAAACTAACTCTGAACCACGTGAGGAGCTGCATCCAGAATCTCCCCAGCTGCTGCATCCTGGATGAAGGAGGCAACCCCGTCTCCTGGAGTTTGATGGATGAGCTGTACTCAGTCAGAATGGGGTTCACTCTGCCTGAGTATCGCAAGCTAGGATATATTAAGACCATCACTGCTGTACTTGTAAACAAAGCACGTTCACTGGGCTTACCAGTCTATTGCCATGTTCATAGAATGAACAAGGAGATGTTACACTTCTTAAATTCTCAGGACTGCACAGTATATCCTGAAATGTACATGCTGCTTTTTGTCACCTCAAGGCATCAGCAGGGTGAGCCAGAATAAGATTAGTCTGGGAGAGTTATCCCAAACAACAATGAGAAATCTCTCTGGTCTGGTTACCATGTTAGTGAAATCACTGCTAGTCTACCttgaatgcaatttatttttgtgccaGACTAATTATTGTTTCAGGTGCATTAAGTCATAATTGCtgtcactttattattattattattattattattattattattattattattattattat

Function

GO: NA

KEGG:

id description
K00628 GLYAT; glycine N-acyltransferase / glycine N-benzoyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002284 True 1089 mRNA 0.43 5 10240092 10244785

Neighbor

gene id symbol gene type direction distance location
AMCG00002281 NA coding downstream 559 10225288 ~ 10239533 (-)
AMCG00002282 spsb1,LOC107716103,LOC107687410,LOC107703063,LOC107591103,LOC107737563,LOC103042472 coding downstream 42548 10189763 ~ 10197544 (-)
AMCG00002283 slc25a33,LOC107708828 coding downstream 146989 10079157 ~ 10093103 (-)
AMCG00002285 NA coding downstream 163426 10066912 ~ 10076666 (-)
AMCG00002286 NA coding downstream 209686 10024419 ~ 10030406 (-)
AMCG00002292 NA coding upstream 146941 10391726 ~ 10403880 (-)
AMCG00002302 NA coding upstream 511047 10755832 ~ 10789955 (-)
AMCG00002303 NA coding upstream 682083 10926868 ~ 10929003 (-)
AMCG00002313 NA coding upstream 1033641 11278426 ~ 11279133 (-)
AMCG00002312 NA coding upstream 1048309 11293094 ~ 11304845 (-)
G122226 NA non-coding downstream 15110 10223213 ~ 10224982 (-)
G122131 NA non-coding downstream 388716 9848235 ~ 9851376 (-)
G122061 tardbp,LOC107716231,LOC107586522 non-coding downstream 618620 9621028 ~ 9621472 (-)
G122037 NA non-coding downstream 952505 9283969 ~ 9287587 (-)
G122019 NA non-coding downstream 1026663 9138447 ~ 9213429 (-)
G122302 NA non-coding upstream 505626 10750411 ~ 10750781 (-)
G122319 NA non-coding upstream 567401 10812186 ~ 10813876 (-)
G122376 NA non-coding upstream 1022779 11267564 ~ 11274527 (-)
G122432 NA non-coding upstream 1162739 11407524 ~ 11409586 (-)
G122438 NA non-coding upstream 1204781 11449566 ~ 11449791 (-)
AMCG00002279 NA other downstream 387017 9836918 ~ 9853075 (-)
AMCG00002276 NA other downstream 406868 9830519 ~ 9833224 (-)
AMCG00002275 ube4b,LOC107681967,LOC107570768 other downstream 438984 9757425 ~ 9801108 (-)
AMCG00002265 NA other downstream 619965 9608750 ~ 9620127 (-)
AMCG00002223 NA other downstream 2400681 7826641 ~ 7839411 (-)
AMCG00002288 NA other upstream 25104 10269889 ~ 10279984 (-)
AMCG00002301 NA other upstream 593019 10837804 ~ 10847201 (-)
AMCG00002317 plekhm2 other upstream 1269215 11514000 ~ 11527918 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other upstream 1403126 11647911 ~ 11685089 (-)
G122597 NA other upstream 1486832 11731617 ~ 11734324 (-)

Expression


Co-expression Network