AMCG00002333


Basic Information

Item Value
gene id AMCG00002333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 11694337 ~ 11700677 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002333
CCTTTCCAGCGAGCTGATAGTGTTCTCGGTCTCGGCAGCGGCTCTCTGGGACAGAGGAACACTGAGGAACAGCTGCTGCACAGACACCACAGACTCCAGgggaccgagagagagagagagacagagagagagcggcaGAGCAGCGATTCTCACACCTTGTCCTCAGTAATGATGGCAGCCCAGACGCCCCAGAAGAGGATGGTGTCATCTGTGTTCATCACACTGGCGACTCCCTCCCGTGCCACGCCCCGCACACCCACTGGCACACAGCCTGGCAAACCAGTAGGCACACTGACTGGCACACAGACTGGCCAACCAGCAGGCACACTGACTGGCACACAGACTGGCCAACCAGCAGGCAAACTGACTGGCACACAGACTGGCCAACCAGTAGGCACACTGACTGGCACACAGACTGGCCAACCAGCAGGCACACTGACTGGCACACAGACTGGCCAACCAGCAGGCACACTGACTGGCACACAGACGGGCAAACAAGCAGGCACACTGACTGGCATCAATTCCAAGTACACCAGACTCAATGCCACCACGCCCTCCAGCCCTGGTGCAGTGCCCCAGCCTCCCCCCATCACCACTGGCCTCACCAGGAAActaccacccccacccccctctgcCAATGGACAGCCAACAGCAGGAGATAACTGCACTGATGACCTGccacccccgccccctcctGAGGAAGCAACCCTGACCCAGCACTCCACACCACCCCCGCCCCCGCCTTCCCTGTACACCCCAGTGCCTCCTGTCTCCAGCGCAGAGATGCTGCACAGTCCACCGGCCCCCCAACTGCAGGGTGGTGTGGTCGGGAGTCAGCATGGACAGGGAGCTCCCCCTGGTGGTGACAAGCAGGTGTTGCAAGGCCAGCAGCACATCCAATCAGAACTGCTGGACTGTGAGAGCAAAgAGCTCTGTGGTTTTTGCCGTAAGTCAGTGCCGCTTGCTTCCCCAGCGATCGAGGCGATGAACAGGACGTACCACCCTGCCTGCTTCCTGTGCCGCCAATGTCGCCACCCGCTGGCTGGGGAGCTGTACTACAACAAGGCCGGGACCCCACTGGCCCTGGACAAGGCCTTCCACCCTGCTTGCTTCACCTGTGTTGTGTGCAGCCAGCCAATCGGAGCCGAGCGATTCGCAGTGGACGACAACAACGAACTTCACTGCTTGCTTGACTACTACAGgagGTTTGCATCtcgctgctgtgtgtgtgaacagctgATCATCCCAGCACCGGATGGCCGGGACTTGTACACTGTGGAGTGTCTGGGCCGCAGCTTCCATGAGGCCTGCTACTGCTGCCAGgtGTGTGGCGTGCAATTGTCTCCGGAGCCGACTGATCAGGGCTGCTTCCCCCTGGACGACCGCATCCTCTGCAAGCCCTGCCACATCAACCTGGCCCAGCAGAGCACCCCCTGACCCCTGTGTGACCCCACTTGTGACCTGACCCCTGTACGACCTCTCCCTGACCTGACAGCCACACTCCAGTACCCCCACTGCACTGCcctttgacctctgacccctccGCCCCTGACCTTCTTCTTGGgctttgctattattattttttatttctcagatttataattaataaggGACCACTGAATGTTCTCAGTCATTGGAGCACCTGGGTGTTTTATTGTAACTGaccttttttatattgtatacatatccttctctctctgtctgtttgtttctcatctttatttattctcattaatcaataaaatattttcaaacacacactTGGTTCTGTGTCTT

Function

GO: NA

KEGG:

id description
K24416 FBLIM1, FBLP1; filamin-binding LIM protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002333 True 1776 mRNA 0.57 8 11694337 11700677

Neighbor

gene id symbol gene type direction distance location
AMCG00002326 NA coding downstream 63428 11629149 ~ 11630909 (-)
AMCG00002328 NA coding downstream 73678 11612396 ~ 11620659 (-)
AMCG00002320 NA coding downstream 147880 11542691 ~ 11546457 (-)
AMCG00002321 LOC106582762 coding downstream 153058 11533550 ~ 11541279 (-)
AMCG00002322 NA coding downstream 162322 11531278 ~ 11532015 (-)
AMCG00002334 NA coding upstream 2659 11703336 ~ 11705695 (-)
AMCG00002335 NA coding upstream 7581 11708258 ~ 11711311 (-)
AMCG00002336 fbxo42,LOC107573139,LOC106565130 coding upstream 19539 11720216 ~ 11725951 (-)
AMCG00002338 NA coding upstream 66607 11767284 ~ 11772145 (-)
AMCG00002337 NA coding upstream 72919 11773596 ~ 11783638 (-)
G122530 NA non-coding downstream 65902 11601972 ~ 11628435 (-)
G122438 NA non-coding downstream 244546 11449566 ~ 11449791 (-)
G122432 NA non-coding downstream 284751 11407524 ~ 11409586 (-)
G122376 NA non-coding downstream 419810 11267564 ~ 11274527 (-)
G122319 NA non-coding downstream 880461 10812186 ~ 10813876 (-)
G122548 NA non-coding upstream 13732 11714409 ~ 11716145 (-)
G122551 NA non-coding upstream 17853 11718530 ~ 11718969 (-)
G122632 NA non-coding upstream 143715 11844392 ~ 11845671 (-)
G122633 NA non-coding upstream 146404 11847081 ~ 11848192 (-)
G122636 NA non-coding upstream 156714 11857391 ~ 11859325 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 9248 11647911 ~ 11685089 (-)
AMCG00002317 plekhm2 other downstream 166419 11514000 ~ 11527918 (-)
AMCG00002301 NA other downstream 847136 10837804 ~ 10847201 (-)
AMCG00002288 NA other downstream 1414353 10269889 ~ 10279984 (-)
AMCG00002279 NA other downstream 1841262 9836918 ~ 9853075 (-)
G122597 NA other upstream 30940 11731617 ~ 11734324 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other upstream 147793 11848470 ~ 11854891 (-)
AMCG00002351 NA other upstream 168930 11869607 ~ 11872862 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other upstream 295151 11995828 ~ 12006352 (-)
G122862 NA other upstream 1327520 13028197 ~ 13029406 (-)

Expression


Co-expression Network