Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00002585 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 21644360 ~ 21645046 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko03440 | Homologous recombination |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00002585 | True | 195 | mRNA | 0.48 | 2 | 21644360 | 21645046 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002586 | NA | coding | downstream | 283817 | 21355932 ~ 21360543 (-) |
| AMCG00002583 | LOC107711341,LOC107691508 | coding | downstream | 516107 | 21127114 ~ 21128253 (-) |
| AMCG00002578 | NA | coding | downstream | 1131431 | 20505594 ~ 20512929 (-) |
| AMCG00002580 | LOC108434887,LOC108272386,LOC108232307,LOC106521611 | coding | downstream | 1279161 | 20359557 ~ 20365199 (-) |
| AMCG00002579 | NA | coding | downstream | 1369910 | 20269560 ~ 20274450 (-) |
| AMCG00002589 | tmem65,LOC108429253,LOC103374125 | coding | upstream | 113787 | 21758833 ~ 21778461 (-) |
| AMCG00002591 | rnf139,LOC106569923 | coding | upstream | 150308 | 21795354 ~ 21802954 (-) |
| AMCG00002593 | tatdn1,LOC102775897 | coding | upstream | 160298 | 21805344 ~ 21812132 (-) |
| AMCG00002592 | NA | coding | upstream | 170419 | 21815465 ~ 21837472 (-) |
| AMCG00002595 | scgn,LOC106606120 | coding | upstream | 375530 | 22020576 ~ 22039356 (-) |
| G124327 | NA | non-coding | downstream | 527625 | 20979097 ~ 21116735 (-) |
| G124222 | NA | non-coding | downstream | 1103837 | 20540307 ~ 20540523 (-) |
| G124175 | NA | non-coding | downstream | 1309906 | 20302072 ~ 20334454 (-) |
| G124068 | NA | non-coding | downstream | 2360067 | 19283878 ~ 19284293 (-) |
| G123981 | NA | non-coding | downstream | 2861994 | 18782145 ~ 18782366 (-) |
| G124402 | NA | non-coding | upstream | 149727 | 21794773 ~ 21794988 (-) |
| G124429 | NA | non-coding | upstream | 273654 | 21918700 ~ 21918915 (-) |
| G124431 | NA | non-coding | upstream | 280561 | 21925607 ~ 21925856 (-) |
| G124434 | NA | non-coding | upstream | 296131 | 21941177 ~ 21953671 (-) |
| G124535 | NA | non-coding | upstream | 791840 | 22436886 ~ 22438729 (-) |
| AMCG00002533 | ulk4,LOC107704090 | other | downstream | 3602787 | 17933464 ~ 18041573 (-) |
| G123829 | NA | other | downstream | 3654895 | 17922452 ~ 17989465 (-) |
| AMCG00002524 | NA | other | downstream | 3938071 | 17690008 ~ 17706289 (-) |
| AMCG00002503 | NA | other | downstream | 4670059 | 16958162 ~ 16974301 (-) |
| G123585 | NA | other | downstream | 4804638 | 16836156 ~ 16839722 (-) |
| AMCG00002584 | NA | other | upstream | 2009 | 21647055 ~ 21678545 (-) |
| AMCG00002596 | NA | other | upstream | 256246 | 21901292 ~ 21902597 (-) |
| G124719 | NA | other | upstream | 1440948 | 23085994 ~ 23296115 (-) |
| AMCG00002629 | sqle,LOC106579093,LOC102798444,LOC106605546 | other | upstream | 1536875 | 23181921 ~ 23192656 (-) |
| G124829 | NA | other | upstream | 2616519 | 24261565 ~ 24261823 (-) |
