G122858


Basic Information

Item Value
gene id G122858
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13000841 ~ 13005335 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154042
CAGCCTCTGCAGACCTACGGGGAGAAGAGCATCCCTGGGGTTTGCGTAGTGTGTCGATTTATTGTGAAGAGGAACTTtaccagaaaataaaaccaagGAGGCAATCGTTGAGAAACTGCATTCCGTGTGCAACATCATGCGCTTCCTGAAAGCCGCTTGCACGAGGGTTATTGGCCGCTATTCTGGCAATTTGGCTGATGCCCTCATGGCCAGCTCTGACCCAAGAGAAGTCTGTCGTCAAGTGAAACTTTGCAAGTGACAGAAAACAATTGCAGaaAGCCCTGATTCGGGAGGTCTCGGTGGACTGATGGTCGGGAGGGCTCTGAAATCCTCACATGGTGAAATATAAATCTcaataaagcattaaaaaaactt

Function

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase 19

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154042 True 375 lncRNA 0.47 3 13000841 13005335

Neighbor

gene id symbol gene type direction distance location
AMCG00002389 NA coding downstream 3419 12982829 ~ 12997422 (-)
AMCG00002385 tsnare1,si:ch211-208k15.1,LOC106605505,LOC107679652 coding downstream 496815 12483894 ~ 12504026 (-)
AMCG00002383 NA coding downstream 740435 12251292 ~ 12260406 (-)
AMCG00002384 NA coding downstream 751895 12248147 ~ 12248946 (-)
AMCG00002382 smarcc1,LOC106605342,LOC106581105 coding downstream 797815 12185034 ~ 12203026 (-)
AMCG00002392 NA coding upstream 27294 13032629 ~ 13044363 (-)
AMCG00002398 NA coding upstream 88729 13094064 ~ 13102528 (-)
AMCG00002395 NA coding upstream 113145 13118480 ~ 13121283 (-)
AMCG00002399 NA coding upstream 146254 13151589 ~ 13152326 (-)
AMCG00002396 NA coding upstream 147033 13152368 ~ 13179775 (-)
G122801 NA non-coding downstream 756927 12195920 ~ 12243914 (-)
G122726 NA non-coding downstream 955822 12043315 ~ 12045019 (-)
G122621 NA non-coding downstream 1136785 11862903 ~ 11864056 (-)
G122636 NA non-coding downstream 1141516 11857391 ~ 11859325 (-)
G122633 NA non-coding downstream 1152649 11847081 ~ 11848192 (-)
G122869 NA non-coding upstream 46691 13052026 ~ 13052390 (-)
G122877 NA non-coding upstream 61886 13067221 ~ 13067627 (-)
G122879 NA non-coding upstream 63499 13068834 ~ 13069238 (-)
G122897 NA non-coding upstream 136533 13141868 ~ 13147672 (-)
G122942 NA non-coding upstream 280002 13285337 ~ 13286312 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 994489 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1127979 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1145950 11848470 ~ 11854891 (-)
G122597 NA other downstream 1266517 11731617 ~ 11734324 (-)
AMCG00002327 spen,LOC108414948,LOC106565133,LOC107591084,LOC107737540 other downstream 1315752 11647911 ~ 11685089 (-)
G122862 NA other upstream 22862 13028197 ~ 13029406 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 643892 13649227 ~ 13654247 (-)
G123263 NA other upstream 1935925 14941260 ~ 14946311 (-)
G123585 NA other upstream 3830821 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3952827 16958162 ~ 16974301 (-)

Expression


Co-expression Network