Gene
RNA
| Item | Value |
|---|---|
| gene id | G122942 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 13285337 ~ 13286312 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU154142 | True | 976 | lncRNA | 0.62 | 1 | 13285337 | 13286312 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002405 | ccdc12,LOC102782761 | coding | downstream | 35486 | 13238743 ~ 13249851 (-) |
| AMCG00002404 | NA | coding | downstream | 58193 | 13219608 ~ 13227144 (-) |
| AMCG00002403 | nacad,LOC107579097 | coding | downstream | 71534 | 13196825 ~ 13213803 (-) |
| AMCG00002397 | NA | coding | downstream | 99300 | 13182721 ~ 13186037 (-) |
| AMCG00002396 | NA | coding | downstream | 105562 | 13152368 ~ 13179775 (-) |
| AMCG00002410 | setd2,LOC106606040,LOC107596709 | coding | upstream | 46683 | 13332995 ~ 13369397 (-) |
| AMCG00002411 | NA | coding | upstream | 90855 | 13377167 ~ 13384055 (-) |
| AMCG00002415 | NA | coding | upstream | 120040 | 13406352 ~ 13411130 (-) |
| AMCG00002416 | NA | coding | upstream | 127988 | 13414300 ~ 13430384 (-) |
| AMCG00002417 | LOC106605926,LOC106594359 | coding | upstream | 172171 | 13458483 ~ 13478876 (-) |
| G122897 | NA | non-coding | downstream | 137665 | 13141868 ~ 13147672 (-) |
| G122879 | NA | non-coding | downstream | 216099 | 13068834 ~ 13069238 (-) |
| G122877 | NA | non-coding | downstream | 217710 | 13067221 ~ 13067627 (-) |
| G122869 | NA | non-coding | downstream | 232947 | 13052026 ~ 13052390 (-) |
| G122858 | NA | non-coding | downstream | 280002 | 13000841 ~ 13005335 (-) |
| G122945 | NA | non-coding | upstream | 2729 | 13289041 ~ 13289249 (-) |
| G122946 | NA | non-coding | upstream | 2996 | 13289308 ~ 13289916 (-) |
| G122947 | NA | non-coding | upstream | 4814 | 13291126 ~ 13291819 (-) |
| G122948 | NA | non-coding | upstream | 6009 | 13292321 ~ 13292568 (-) |
| G122949 | NA | non-coding | upstream | 6538 | 13292850 ~ 13293745 (-) |
| G122862 | NA | other | downstream | 255931 | 13028197 ~ 13029406 (-) |
| AMCG00002368 | rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 | other | downstream | 1278985 | 11995828 ~ 12006352 (-) |
| AMCG00002351 | NA | other | downstream | 1412475 | 11869607 ~ 11872862 (-) |
| AMCG00002350 | tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 | other | downstream | 1430446 | 11848470 ~ 11854891 (-) |
| G122597 | NA | other | downstream | 1551013 | 11731617 ~ 11734324 (-) |
| AMCG00002421 | sec61b,LOC102796100 | other | upstream | 362915 | 13649227 ~ 13654247 (-) |
| G123263 | NA | other | upstream | 1654948 | 14941260 ~ 14946311 (-) |
| G123585 | NA | other | upstream | 3549844 | 16836156 ~ 16839722 (-) |
| AMCG00002503 | NA | other | upstream | 3671850 | 16958162 ~ 16974301 (-) |
| AMCG00002524 | NA | other | upstream | 4403696 | 17690008 ~ 17706289 (-) |
