G122946


Basic Information

Item Value
gene id G122946
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 13289308 ~ 13289916 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU154146
GCTGCTCCTCACCCACGGCGCCTGTGTAGGCCAGCACACTGTGCAGCTCCTCAGGGGTGGGCGACTTTGCCAGGAACTCGCTGAGCAGCGAGAACAGCGCAGTCTGCACCGTCCGCAGCTCGTCAGACAGGGGGCCACCGTCTCGCTCCACACTTAccacaggcagacaggcagagggacagagacaggagcACACGTCAATACAGACTGAGACACAGAAGTCAGAGATCTGTGTATATGCAGGTCCACCAGGGGGAGCTGTTGGCAATCTGACCAGCTGCAGGTAAAGCAGGTGTAACTAAtgcggctgtgtgtgtgtgtgtgtgtggaattaTTAGGTGTCATAGCGTATCCTCCCTCTTTTTTTTAcatctctcctcttctcctcgCTTCCTCTCGGTCTCTATCTCtatcttcctctctcctctcagctCCTACCCATAATGTGTCCTGATGGAGTCCAGGATGTACTGCACTCCGTACTTCCTGCGGAACCGCTGCTTCCCTTGCCTGATGACGGTGGACAGGTACTGCACATgctctgcagagagagaaggagggaacGGGACAGAGTATGTTAAATACAGGCGTACATGTTCTGTGCAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU154146 True 609 lncRNA 0.55 1 13289308 13289916

Neighbor

gene id symbol gene type direction distance location
AMCG00002405 ccdc12,LOC102782761 coding downstream 39457 13238743 ~ 13249851 (-)
AMCG00002404 NA coding downstream 62164 13219608 ~ 13227144 (-)
AMCG00002403 nacad,LOC107579097 coding downstream 75505 13196825 ~ 13213803 (-)
AMCG00002397 NA coding downstream 103271 13182721 ~ 13186037 (-)
AMCG00002396 NA coding downstream 109533 13152368 ~ 13179775 (-)
AMCG00002410 setd2,LOC106606040,LOC107596709 coding upstream 43079 13332995 ~ 13369397 (-)
AMCG00002411 NA coding upstream 87251 13377167 ~ 13384055 (-)
AMCG00002415 NA coding upstream 116436 13406352 ~ 13411130 (-)
AMCG00002416 NA coding upstream 124384 13414300 ~ 13430384 (-)
AMCG00002417 LOC106605926,LOC106594359 coding upstream 168567 13458483 ~ 13478876 (-)
G122945 NA non-coding downstream 59 13289041 ~ 13289249 (-)
G122942 NA non-coding downstream 2996 13285337 ~ 13286312 (-)
G122897 NA non-coding downstream 141636 13141868 ~ 13147672 (-)
G122879 NA non-coding downstream 220070 13068834 ~ 13069238 (-)
G122877 NA non-coding downstream 221681 13067221 ~ 13067627 (-)
G122947 NA non-coding upstream 1210 13291126 ~ 13291819 (-)
G122948 NA non-coding upstream 2405 13292321 ~ 13292568 (-)
G122949 NA non-coding upstream 2934 13292850 ~ 13293745 (-)
G122950 NA non-coding upstream 3834 13293750 ~ 13294149 (-)
G122951 NA non-coding upstream 4905 13294821 ~ 13295034 (-)
G122862 NA other downstream 259902 13028197 ~ 13029406 (-)
AMCG00002368 rbm24b,rbm24,rbm24a,LOC106596654,LOC107601977,LOC106517771,LOC105905339 other downstream 1282956 11995828 ~ 12006352 (-)
AMCG00002351 NA other downstream 1416446 11869607 ~ 11872862 (-)
AMCG00002350 tmem240a,tmem240,LOC107687438,LOC108275582,LOC105898995,LOC107593924,LOC107673083 other downstream 1434417 11848470 ~ 11854891 (-)
G122597 NA other downstream 1554984 11731617 ~ 11734324 (-)
AMCG00002421 sec61b,LOC102796100 other upstream 359311 13649227 ~ 13654247 (-)
G123263 NA other upstream 1651344 14941260 ~ 14946311 (-)
G123585 NA other upstream 3546240 16836156 ~ 16839722 (-)
AMCG00002503 NA other upstream 3668246 16958162 ~ 16974301 (-)
AMCG00002524 NA other upstream 4400092 17690008 ~ 17706289 (-)

Expression


Co-expression Network