Gene
RNA
| Item | Value |
|---|---|
| gene id | G123646 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 17075312 ~ 17075549 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030145 | manganese ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU155036 | True | 238 | lncRNA | 0.36 | 1 | 17075312 | 17075549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002504 | NA | coding | downstream | 3387 | 17063407 ~ 17071925 (-) |
| AMCG00002505 | NA | coding | downstream | 22506 | 17021419 ~ 17052806 (-) |
| AMCG00002492 | tmem158,LOC102794155 | coding | downstream | 227196 | 16847424 ~ 16848116 (-) |
| AMCG00002490 | NA | coding | downstream | 244041 | 16824229 ~ 16831271 (-) |
| AMCG00002491 | zdhhc3,LOC103144443 | coding | downstream | 262040 | 16792556 ~ 16813272 (-) |
| AMCG00002508 | mturn,LOC107572558,LOC107559763 | coding | upstream | 4955 | 17080504 ~ 17090314 (-) |
| AMCG00002509 | eaf1 | coding | upstream | 17357 | 17092906 ~ 17097083 (-) |
| AMCG00002510 | capn7,LOC107705521,LOC107755679 | coding | upstream | 61627 | 17137176 ~ 17158023 (-) |
| AMCG00002514 | NA | coding | upstream | 107852 | 17183401 ~ 17185908 (-) |
| AMCG00002516 | NA | coding | upstream | 231717 | 17307266 ~ 17308556 (-) |
| G123642 | NA | non-coding | downstream | 25256 | 16995129 ~ 17050056 (-) |
| G123637 | NA | non-coding | downstream | 92666 | 16980831 ~ 16982646 (-) |
| G123527 | NA | non-coding | downstream | 420449 | 16653499 ~ 16654863 (-) |
| G123524 | stt3b,LOC108412618 | non-coding | downstream | 423858 | 16648407 ~ 16651454 (-) |
| G123489 | NA | non-coding | downstream | 592261 | 16481568 ~ 16483051 (-) |
| G123705 | NA | non-coding | upstream | 158821 | 17234370 ~ 17238544 (-) |
| G123788 | NA | non-coding | upstream | 584518 | 17660067 ~ 17675110 (-) |
| G123824 | ctnnb1 | non-coding | upstream | 735969 | 17811518 ~ 17815466 (-) |
| G123845 | NA | non-coding | upstream | 975548 | 18051097 ~ 18052332 (-) |
| G123876 | NA | non-coding | upstream | 1130119 | 18205668 ~ 18206132 (-) |
| AMCG00002503 | NA | other | downstream | 101011 | 16958162 ~ 16974301 (-) |
| G123585 | NA | other | downstream | 235590 | 16836156 ~ 16839722 (-) |
| G123263 | NA | other | downstream | 2129001 | 14941260 ~ 14946311 (-) |
| AMCG00002421 | sec61b,LOC102796100 | other | downstream | 3421065 | 13649227 ~ 13654247 (-) |
| G122862 | NA | other | downstream | 4045906 | 13028197 ~ 13029406 (-) |
| AMCG00002524 | NA | other | upstream | 614459 | 17690008 ~ 17706289 (-) |
| G123829 | NA | other | upstream | 846903 | 17922452 ~ 17989465 (-) |
| AMCG00002533 | ulk4,LOC107704090 | other | upstream | 857915 | 17933464 ~ 18041573 (-) |
| AMCG00002584 | NA | other | upstream | 4571506 | 21647055 ~ 21678545 (-) |
| AMCG00002596 | NA | other | upstream | 4825743 | 21901292 ~ 21902597 (-) |
