AMCG00005149


Basic Information

Item Value
gene id AMCG00005149
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 16975583 ~ 16980358 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005149
ATGGAGGATCTGCTAGTGCAAAGATGCAATATACCTGGAGACACCAGTGATGAAGACCAAGAAGACCTTCCGTATGATGGAGACCTTCACGATAATGATAAATATACGGTTGGCGAGCGTAACTCTGATATCAATGAACAAACTGTAATACCTTCAGTATCTGGTGAAAAACTCTCAGTTCAGCCTGCTGCAAGGAATACGTTTGAAACAACCAATATCCCCAACAGTACACCTTCTCTTCCTGTTTTAGAGCGTGGAACTGAAGAAAATGAGATAGAAAATCATTCCTCGGAGGATATTGTTGGCAGCTACCTCACATCTGTAAATCTCAAAGATGGCAGAACTCATCTACAGCTCAGGAATGATACAAAGGTTGGAGACACTCTTGAAATCGGTGATCAGGAAACACCCCGGTCAAGGATCACAGAGGTACTCCTTCGACACTTCTCTGAAGAAGATTTCAATAGCTTAAGCAAAGACATAGAAGCCGAGACAATGCCTGAGACTTCTTTTACTGAAAGCGTTGATGAAACAGTATTGAACAAATCTGACCTGCAGAAATCTAACCACATGTCACAACAATCTAATGAAGGGTGCAGTGAAAATGGCTTAGAAGAGAATGTAACAACTGAACCTAATAAAGAAACTGAGCATGCCATCTGGAATGAGACAGAAGAGTCTAGTACAACCGAGTTACAGAAATCCACTGACACCCTGGGGGCAGAAAGCAGTCTCGCCGCATCTAATGACGAACATGAATCCGAACGATGGAGCAGACCAGAGAGTCCAGGCTTGCAAGATTACGAAGATACCCAACGGTCTGTTTTAGGAAGAGCTTGGTCATGTAATGAGCTGAAATATGGACAAGGCCAGGTTCATTATCCTCTCCCTGATTTTTCCAAGGTGGCTCCTAAAATTAGAATCCCTAAAGGAAACTCTGCTGGGCGGACTGGGCAGACCTGTGGAATTGTGAGGATTAAGTCCTCCCCAGGACTGCTGAGCAAATCTCCAGCTCCCACTTCAGTGGAAACCATAAGGAAAGTCCTTGACACCATTCAGACACCAGAtaccacatttgttttaactgaCCAACAAAGAAGACCAGATGATCCCAGACAGAGTCCAGAACTTGTTCAACATTTGCAGGAAATGGTAAAGTCGGGAAAGGTGCAGAACTACTCGACAGCAACACTGAGGAAACTGGTCTCCAGGGACCAAGTGGAAGAATTTAGAAACTGTCTGAACTCAATGTCTTTAGGGATCAAAGAACAGCAAGAGAGTTTAGTTGATGCCCAAGATAAATTAGAAAGGAGTTACATGGCCAAGAAAGAAGAACACCGTGCGCTCGAGCTACGGAAGTATATGGGAATGTCTAAAAACATTGGGGAATTTGATCCTGAAAGGCAGGTGGAGGGAGAAATATTTAGAATAGGAATGGGCCTGGAAGACATTAAAGAGCAGATTGATGAAAATGTGTGCTCTCAGCTTTCGCCACAAATATCATTCACCTCACCGGCTCCATTGCCATTTGCTGACTCCATCTTCTCATCTAATACATCACTGCATGAGcCAGGAAGCTATATGCAAGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005149 True 1593 mRNA 0.44 6 16975583 16980358

Neighbor

gene id symbol gene type direction distance location
AMCG00005150 NA coding downstream 14714 16954875 ~ 16960869 (-)
AMCG00005151 NA coding downstream 31407 16920469 ~ 16944176 (-)
AMCG00005152 NA coding downstream 55119 16915257 ~ 16920464 (-)
AMCG00005148 NA coding downstream 67753 16903900 ~ 16907830 (-)
AMCG00005139 slc25a24,LOC108439838 coding downstream 100328 16862978 ~ 16875255 (-)
AMCG00005165 NA coding upstream 24952 17005310 ~ 17033426 (-)
AMCG00005164 wdr47,LOC102290984 coding upstream 67687 17048045 ~ 17062557 (-)
AMCG00005163 NA coding upstream 84241 17064599 ~ 17087674 (-)
AMCG00005162 camsap2,LOC105906931,LOC107679834 coding upstream 121169 17101527 ~ 17109305 (-)
AMCG00005154 nr5a2,rtftz-f1,LOC106613481,LOC106574163 coding upstream 244399 17224757 ~ 17241719 (-)
G145760 NA non-coding downstream 10509 16964203 ~ 16965074 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 600166 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 1708635 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 1717919 15255889 ~ 15257664 (-)
G145434 NA non-coding downstream 1720695 15253513 ~ 15254888 (-)
G145995 NA non-coding upstream 1044407 18024765 ~ 18025674 (-)
G146022 NA non-coding upstream 1317489 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 1371509 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 2103637 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 2238033 19218391 ~ 19219758 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 996728 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 1440438 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 2006341 14964414 ~ 14969242 (-)
G145046 NA other downstream 3638837 13336209 ~ 13336746 (-)
AMCG00005022 NA other downstream 4627255 12344671 ~ 12348328 (-)
AMCG00005158 NA other upstream 562788 17543146 ~ 17546332 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 1761526 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 2032719 19013077 ~ 19024461 (-)
G146313 NA other upstream 2589701 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 2777874 19758232 ~ 19761446 (-)

Expression


Co-expression Network