AMCG00005183


Basic Information

Item Value
gene id AMCG00005183
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 18046691 ~ 18049244 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00005183
CAGAGCAGGTAGCGCTGAGACTGCCTCCAGGCCTGAAACAATACTGCGAGAACATAAagctccacacacacagcatttcGACAATCTGTACAGTCTTTGCAGGGAGCGTTTGGGAAGAGAGGATGCAGACAGCATTATATCTGGTCATGATGCATCAGGCCGCACACAAGGATTTATCTGAGGCGTCGGACATCCTGGTGGAGAATAAGAGAAACAGACAGAAAGACTGGAGATCCAGGTTGAGATATTTTCTGCAAAGACCTTCTACCATGAAGACCTCCTTCTCGAGAAGAAAGTCCTATAGGCCTACAGCTGATGAAGTAAACGAATGGGCCCAGTCCTTGGAAATACTACTTGCCTATAAAtacGGACTGGCTGCGTTCCGGATCTTCCTGAAATCGGAGTTCTGTGAGGAGAATCTCGAGTTCTGGCTCGCCTGCGAGGATTTCAGGAAAATCACATCGCCAGCGAAGACGGCTTCCAGGGCAAAGTGGATTTATGAAGAATTCATCATGAGTGAGGCCCCAAAAGAGATCAACTTGGATTTTTATACGAAAGACGCCATCACTCAGAACCTGCAGCTGCCCACCCCCTCCTGCTTCAGCGCTGCCCAGAAACGAGTCTACTACCTAATGGAGAACAATTCGTACCCACGATTTCTCCAATCTGAGATCTACAAAGAGCTGCGTGCCGTGTCTCTGGGGGAAGGGAAGTATCTGAAGACCTGAACTTTAGCCCGTTGCTTGAAGAAATTTCTATGAAGTGTGTAAAGGGTCAAAGAAAGGACCTTTTCAAAGGTCGTTTTGTTGGAGCGTGGAAGAGTCGATACAGAGTGTAAAGTGCGGAGTGAACATTGTGAAATATGAGctgtttttttacacaaatgTGATGAGGCAACGCTTAGACTTTGACTGTGTGAAAGCACAATTCCCTGCATCAAACAAGTCATAAAAAGGTGAACATCAGGGAGACGTGAAGTGGTTTAAGAATTCAGCTCTTTAAAtgttatgttctttttttatgcaTCTTGTATTGCTCTTGTAAGAGTACAAAGATGACGTTTCATAGGgtaaaaaatgcaaacactaACAGGTCTTGGTGAAAAGGGATTTATGGAGTTACGATGCTGTGAACTAGTTACAACATGTGATGCCTTGCGTCGCTGGACTGCACGGCACCCTTTCCTCTGAGCAGCGGGCTTGTGTGCTGAACCCTGCGCTGCGTCAGAACAGCTGTGATCCAGTGCGTCCTCTCGATCACTGCGGTGTTTACAGCGAATCAGTGACACCACATTCGTCTTCCAAATGTGGATTTATGTTAAGACATCGAGGCTGCAAACAGTGTTTAAAGGGCAAGTGTATGTTGTTAATCATTCTTGTCCCATTTAAATACTAAATTCACTGCCTTAAATGCTTTTGCTCTTGATCCAAGAGTTGGACGATGGATGGACAGATGTGTGTAAATACTTGCTTTCTGCAAATCTCAAGATATTTGAACTTACCCCCCATTTCTGTGGTAATGGTTTATAGATTcctataattacatttaaagataatGCACAGGTCACTTTTCTAAACCTCATGCAACAATTGGTAGCAGGGTCAGgtcattgtatatatataatatctttttttttttttttttttttttgtataatattt

Function

GO: NA

KEGG:

id description
K18154 RGS2; regulator of G-protein signaling 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00005183 True 1661 mRNA 0.43 5 18046691 18049244

Neighbor

gene id symbol gene type direction distance location
AMCG00005184 NA coding downstream 10347 18028243 ~ 18036344 (-)
AMCG00005185 cdc73,LOC101483205,LOC105941386,LOC106633477 coding downstream 24460 18011528 ~ 18022231 (-)
AMCG00005171 NA coding downstream 63323 17982339 ~ 17983368 (-)
AMCG00005170 cdc73 coding downstream 71042 17972354 ~ 17975649 (-)
AMCG00005174 NA coding downstream 271265 17761420 ~ 17775426 (-)
AMCG00005187 NA coding upstream 14585 18063829 ~ 18066368 (-)
AMCG00005186 NA coding upstream 21188 18070432 ~ 18073923 (-)
AMCG00005179 NA coding upstream 38161 18087405 ~ 18089115 (-)
AMCG00005178 NA coding upstream 54014 18103258 ~ 18109453 (-)
AMCG00005193 NA coding upstream 493307 18542551 ~ 18545413 (-)
G145995 NA non-coding downstream 21017 18024765 ~ 18025674 (-)
G145760 NA non-coding downstream 1081617 16964203 ~ 16965074 (-)
G145680 LOC101077364,LOC107383562,LOC104957225 non-coding downstream 1671274 16374662 ~ 16375417 (-)
G145441 NA non-coding downstream 2779743 15261347 ~ 15266948 (-)
G145436 NA non-coding downstream 2789027 15255889 ~ 15257664 (-)
G146022 NA non-coding upstream 248603 18297847 ~ 18298103 (-)
G146023 NA non-coding upstream 302623 18351867 ~ 18352132 (-)
G146189 NA non-coding upstream 1034751 19083995 ~ 19086041 (-)
G146227 NA non-coding upstream 1169147 19218391 ~ 19219758 (-)
G146257 NA non-coding upstream 1414763 19464007 ~ 19464975 (-)
AMCG00005158 NA other downstream 500359 17543146 ~ 17546332 (-)
AMCG00005114 tmem56,LOC107712816,LOC107677262,LOC107657764,LOC106578492,LOC106570700,LOC102779182 other downstream 2067836 15958704 ~ 15978855 (-)
AMCG00005111 NA other downstream 2511546 15503082 ~ 15535145 (-)
AMCG00005077 arpc5,arpc5b,LOC103032016,LOC108431159,LOC107698380,LOC104921830 other downstream 3077449 14964414 ~ 14969242 (-)
G145046 NA other downstream 4709945 13336209 ~ 13336746 (-)
AMCG00005207 LOC107384419,LOC103139997,LOC107082609 other upstream 692640 18741884 ~ 18764298 (-)
AMCG00005214 NA other upstream 963833 19013077 ~ 19024461 (-)
G146313 NA other upstream 1520815 19570059 ~ 19573318 (-)
AMCG00005240 NA other upstream 1708988 19758232 ~ 19761446 (-)
AMCG00005256 cpt2,clg17h1orf123,c20h1orf123,cunh1orf123,LOC107668114,LOC107585892,LOC107695271,LOC108441638,LOC107549124,LOC105891296,LOC105925314,LOC106930840,LOC103363808 other upstream 1949923 19999167 ~ 20023507 (-)

Expression


Co-expression Network