G155003


Basic Information

Item Value
gene id G155003
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030142.1
NCBI id CM030142.1
chromosome length 21087710
location 11932112 ~ 11932947 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU195245
TTTCCTTGGCAGTGTGCTGCAGTCAAGATGAAGTCCTCTCGGATCAAAAAGCCACCACAATTGGATGAGATCTTCTCTTTTCCAACTACAAGGTAGGCCATGTAGGGGCGGCCGTGGCCCTGGCCCTGGAGTTCCTGCTTCTCCATGGTCTCAACGCCAGAGACACCTGTCAATCAAACATAGCTGGGGCCTGCAAGTGCAGAAGTCACACCGCAAAGCACCAGGATACACAGAGACGCCATGCTGGGAGTGAGAGAGCTGCGCTACTGCCAGCACACAGTGTCCCGTGCTCTGACCGGTGTCTCTCACAATAACAGGAAAGCAATGCGCGTGCCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU195245 True 337 lncRNA 0.55 2 11932112 11932947

Neighbor

gene id symbol gene type direction distance location
AMCG00005901 NA coding downstream 1262 11918788 ~ 11930850 (-)
AMCG00005899 zmp:0000000521,LOC107696078,LOC107596226,LOC105888700,LOC104964522 coding downstream 14047 11906566 ~ 11918065 (-)
AMCG00005900 NA coding downstream 29722 11897018 ~ 11902390 (-)
AMCG00005884 rgma,LOC103371300 coding downstream 69074 11838001 ~ 11863038 (-)
AMCG00005889 NA coding downstream 251290 11675135 ~ 11680822 (-)
AMCG00005905 NA coding upstream 51716 11984663 ~ 11993731 (-)
AMCG00005893 polrmt,LOC102781777,LOC103149847,LOC101483880,LOC106937851 coding upstream 154096 12087043 ~ 12119953 (-)
AMCG00005960 NA coding upstream 261633 12194580 ~ 12212371 (-)
AMCG00005959 tnfaip8l1,LOC107702643,LOC107727554,LOC107733325 coding upstream 306386 12239333 ~ 12246234 (-)
AMCG00005961 ncln,LOC106573831 coding upstream 334138 12267085 ~ 12280796 (-)
G154954 NA non-coding downstream 242064 11689740 ~ 11690048 (-)
G154909 NA non-coding downstream 317729 11613674 ~ 11614383 (-)
G154906 NA non-coding downstream 318501 11569273 ~ 11613611 (-)
G154848 NA non-coding downstream 515724 11415817 ~ 11416388 (-)
G154817 NA non-coding downstream 612128 11309698 ~ 11319984 (-)
G155058 NA non-coding upstream 70193 12003140 ~ 12023672 (-)
G155059 NA non-coding upstream 74521 12007468 ~ 12017366 (-)
G155073 NA non-coding upstream 192214 12125161 ~ 12126128 (-)
G155183 NA non-coding upstream 514573 12447520 ~ 12447719 (-)
G155235 NA non-coding upstream 672776 12605723 ~ 12611445 (-)
AMCG00005875 NA other downstream 555574 11374475 ~ 11376538 (-)
AMCG00005879 dot1l,LOC106920479 other downstream 571238 11349245 ~ 11360874 (-)
AMCG00005877 sf3a2 other downstream 592977 11336595 ~ 11339135 (-)
AMCG00005876 oaz1,oaz1s other downstream 607044 11320260 ~ 11325068 (-)
AMCG00005831 shdb,LOC107719565,LOC107676987,LOC107729709,LOC103027120,LOC106584413,LOC108439278 other downstream 1066316 10849515 ~ 10865796 (-)
AMCG00005989 NA other upstream 736309 12669256 ~ 12675994 (-)
AMCG00005992 NA other upstream 745458 12678405 ~ 12711136 (-)
AMCG00006063 ctxn1,LOC108441290,LOC106573568 other upstream 910818 12843765 ~ 12854803 (-)
AMCG00005936 march2 other upstream 963607 12896554 ~ 12971406 (-)
AMCG00005939 LOC100697221 other upstream 987176 12920123 ~ 12949967 (-)

Expression


Co-expression Network