AMCG00007217


Basic Information

Item Value
gene id AMCG00007217
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7680455 ~ 7696605 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007217
TCAGTCGAAGAAGAGGACGGGCCGAGCTCTGCCCAGGGAGAGAGTGACAGCCCCCGTGACCCACCCTTTCCGGTCGTCTCCAGCCCAGCTCGGAGCCCCTGCCTTCACCCCAGACCCAAGCCCAGGCCCTGCCAGCCCCCAGCCATGCCCACCCTCcccgaggaagaggaggactCCCCAGAGGAGTTAGACAGCTCCTCCAGCTCTCCAGTCTCTTGTACTCCTGTTGACAACAGACTGGTGAATGTAACTGCACCCTCCATCATTTTCCCAAGACAAGCCGACCAAATGGACCAAGACAGCAAACCGCTCGAACAGACCAGACCGCACAGCCCCAGGCCTCGACTCTCACGGAGCTCGTTCTCTTCAGGGAACCCAATCACCACAGTCGACTACACAGGCCATGTGATTGACCTGGTAAAAGACCAGCTGCCAGATGTCGAGATATCTGATGACGATAAGAAGAAGAATCTGGAGCTGCTGGAGGAAGCAAAGAAAGTCAGTGAGCGCTTCCTGACTCGAAGGGGTCGAAGGTCAACTTGCAGCCTGTCAGACTCCCCGACAGCTCTTTCACCAAATCCCACTCCTCGGTCTTCTCCTGTACCATCAAGAAGCAGCTCCATTACTGTGCCCCCTCAGATCGCTCCGGATGGAAGCGAGGTTAATTATATCACTCCAACCACAACTCAGCATCTGGAGGTGCCCAGTGTCAGAGAGCCAGCAGACGTGATGGGACAGGAGCCGGAGCAGAGCCCCAGAAGACAGGGCGATCGAAAGAACAACGAGAAGCGCAAGGTGTCGCAGGGAACGCTGTCTCCTCGCCACAGCGCCTACGGGAGTCCCAGGGAAGCGTCTCTGGAGcagaaagaaaactgtgacGCACGGCTTGGTGGCGATATGAGGAAGAAGGCCCCGTCGCCTGTGGGCAGAAGGGTGGACGAGGGCCCTGAGGAGGGCTCTGTGAGGAAAAGCCTGGAGGGAGATCACTCTGCCAGGGGGGGCTCCTCTCCCAGTGGCGGGGTGTCCATCTCCAAGGCAGCTGCTCAGGCTCTCCCCCCTGGGGCCTGCACGGCCGAACTGAAGTCCTTTGGCTGTGGCCCTCCCCTCATGAGGGCAGTGTCATGGGATGCTGTGGGGCCCGCCACTGTCCGAAATGGGGCACAGAGCTTTCCAGGCAAGAATGACGAatccttttcattttatgacAAATCCAATAGCGCGCTCCTGAAGTCTACTGGTTACAAGGATTTTCCCGTTCAGCCAGTCAAAGTGCAGAAACTGAGCAAACTGCGTGAGGAAAACAAGCTGATGCGGAACCAGAGCATCGTTGGATCAAAGCTGCCGGATCTCAGTGAAACAGCTGAACAGGAAAAAGGGACCTCTTCCAATACCACTCCAGCATTAGCTACAGAGGAGGAGACCAAAGGCACCTCGGATGTAATGCCTAACATTTCAGACATCATGCTGCGCAAACTCAAACTGCACCGCTCTCTGCCTGGCAGTGCACCTCCCCTCACAGAAAAAGAAGTTGAGACTGCATTCATCCAGCTTTCCTTGGCCTTCCGCAATGACAGTTATACTCTGGAGACGAGGCTGCGTCaagccgagagagagagaaacatgacTGAAGAGAACACAGAGAAAGAACTGGATGATTTTAAAGGGTTTATGAAGGCTGAAAATGCGGCTGTTCGGCAGGGCTCTGCTCTGCTGTGGCAGAACTATGAGCAGAGGGAGGCGTACCAGCGCCTCCTGGAGACAGTGGCGGTACTGCATCGCCTGGCAGTGCGTCTCTCCAGCCGAGCAGAAATGGTGGGAGCTGTGCGGCAGGAAAAGCGTATGAACAAAGCCACTGAAGTGATGATGCAGTATGTAGAGAATTTGAAGAGGACTTACGAGAAGGACCACGCCGAGCTCGTCGAGTTCAAAAAGCTTGCCAACCAGAACTCCAATCGCTGTTACGGTGGCTCCATCGATGCTGGAGATGATGGTATCCCCCGTGCATCGAGATCTATGTCTCTAACCCTAGGAAAGGCTCTGCCTCGACGAAGGGTCAGTGTGGCGGTGGTTCCCAAATTCAACTTGTTAAACATCCCAGGTCAATCCCCCACCTCTATAGGCCCTGGACTACCTGTGCTGTGTGAGGCAAACAGTGGAAAATGCAGTTCCCCCACAGAATCTCCACCAGCACCAATAATGGAGAATGGAAAAGCGAGTGCAGACCAGGAAAATGAGACATCGTCCCCAGCCCCGCCTCCCGGCAACCTAGATGAGATCAGATCTGAGATTAAGGCCAAAATCGAGGAGGATGCATACAATAAAGGCAAGTACGAGGAAGCTCTGAACGTCGTGAGCAGGCTGTGTCCAAAGATTTTACGACAGAATCGCCTGTTCTGGATTATCGCAGCCTCTGCTGTGTTTTTGGCTTTCATCGTCAGTGTCTTTTCATCCTTGAGTAATTCTTACAGCGAACTGGGGGAAGGATCGTCAAGCAAGAGTGCATACTCAGGCAAAAAGCAGAACTTTGGCTGGAATGTCGGGCTGCAGCCTAAGAAACCCACAGCGGAGTAAAACAGAGCATTTCCTCTCACACGCTGGCATAAAACAGACTTGTCCTCCAATGACAGCCTGCTGTGAAGGACTGTCTCGACCATCACAACACAAAGACCACCTGAATATGAACAATTTATGGCAAAGGAGAAGAAACATTCAGGGGCTGTGGACAATCACTTTGCAAGCTTTAATTATACACCCAGATTATTATGTCAACTAAAAAATAGAAACACCGCCAAGGTAGCCAAAGGGACtacaaaaataatgtcatgAAGATAATACTATTGACATGTCGATTAATCGCTCGAGATCTTTGGTTCAAATGAATGTGTAAATCTCTGCTCTTTTTTCAGGTAAATCTGCAGCCTTATTTTAGTCCATGAAAACGATGGGCTGTGCTATCATGGTCTGTGGTTAACTGTATAGGCGATTGCGTGACAGACTTTGATGGAAGTAATGTAATGCTTGACAGGGAGGAACCACACATCTGTCTTCTCAGGTTAGATAAAGCAATGCTGGTCCCACACAGCAATGTATTGAAGTAttcaaaaaacaatcaaagaggttagtttttaattttgttaggTAAAATATtctatattgtgtatttaaaaagagaCCTAGATTGAAGATAACTGCAATGTAGTTTATAAAGTGCAATATTTTTGTAGCAGATGTCCACAAATAGGTTTTGTCCATTTGGTTTTTACTTTCACGGCACTGAGCACCGTCGGTAAGACGGGTCTCCAGATATAAAGGAGCACTATTTTTGAACCGCATgagagcattattttatttatcattgtaAACATCTGCACATGTGTGCTAGCCTTGTACTGTATAGTGCCACCATACTTGATTCTTGAAATAAACCTGCCTTATCACATCTCTTGCAACCGGATTCACTTGGGTGTTTCTGTGGCCAGGAAGTCCTGCATTTCTGGATTCCTTTTTTGTGACTTCctgcagtgaaaaaaaaagattctgcTTTTTCTAAAATGATGCATAAGTGCAAAGAAAGATTTATTTGCACATAtatttccaaactgttacaaCATCcttccatgtttttattttatttattgtattcaataaATCACTAAAGAAAGCTAAAACACAGCTTCTGTGATATAAAAAGGACATTATCTGGAAGTTGGg

Function

GO: NA

KEGG:

id description
K12337 MRVI1, IRAG; inositol 1,4,5-triphosphate receptor-associated cGMP kinase substrate

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007217 True 3711 mRNA 0.49 19 7680455 7696605

Neighbor

gene id symbol gene type direction distance location
AMCG00007218 NA coding upstream 21218 7657532 ~ 7659237 (+)
AMCG00007216 LOC102797294,LOC104954180,LOC108251745 coding upstream 30424 7640451 ~ 7650031 (+)
AMCG00007208 LOC108430817 coding upstream 133761 7535567 ~ 7546694 (+)
AMCG00007209 LOC107553077,LOC107557708,LOC107740430 coding upstream 166483 7513065 ~ 7513972 (+)
AMCG00007203 NA coding upstream 275638 7398093 ~ 7404817 (+)
AMCG00007220 NA coding downstream 5654 7702259 ~ 7704843 (+)
AMCG00007219 rnf141,LOC102797002,LOC100693732 coding downstream 11654 7708259 ~ 7710289 (+)
AMCG00007223 NA coding downstream 142213 7838818 ~ 7844361 (+)
AMCG00007225 NA coding downstream 168773 7865378 ~ 7887173 (+)
AMCG00007224 tmem41b,LOC106562360 coding downstream 275671 7972276 ~ 7984466 (+)
G22027 NA non-coding upstream 4578 7669719 ~ 7675877 (+)
G21985 NA non-coding upstream 73384 7606579 ~ 7607071 (+)
G21949 NA non-coding upstream 148685 7531563 ~ 7531770 (+)
G21924 NA non-coding upstream 183356 7496693 ~ 7497099 (+)
G21902 NA non-coding upstream 213230 7412617 ~ 7467225 (+)
G22038 NA non-coding downstream 8543 7705148 ~ 7705359 (+)
G22076 NA non-coding downstream 204174 7900779 ~ 7901175 (+)
G22192 NA non-coding downstream 557288 8253893 ~ 8254655 (+)
G22204 NA non-coding downstream 748320 8444925 ~ 8445550 (+)
G22208 NA non-coding downstream 753479 8450084 ~ 8450494 (+)
G21891 NA other upstream 301509 7374323 ~ 7378946 (+)
AMCG00007196 svip other upstream 461980 7211564 ~ 7218475 (+)
AMCG00007160 NA other upstream 1904999 5757677 ~ 5775456 (+)
AMCG00007154 ptpmt1,LOC102795413 other upstream 2008310 5668196 ~ 5672145 (+)
AMCG00007148 NA other upstream 2100161 5565941 ~ 5580294 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other downstream 450793 8147398 ~ 8183421 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other downstream 670831 8367436 ~ 8396242 (+)
AMCG00007242 NA other downstream 734497 8431102 ~ 8451582 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other downstream 1001378 8697983 ~ 8711311 (+)
G22372 NA other downstream 1739919 9436524 ~ 9499728 (+)

Expression


Co-expression Network