AMCG00007223


Basic Information

Item Value
gene id AMCG00007223
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7838818 ~ 7844361 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007223
ATTCAGAACGTGCTTAGCCTGTTCTGTGCGGTTCTAACGGAGCATAAGGTCCTGTTTCACTCGACAAGCTACCAGAGGCTGGGAGATGCATGTAGGGCATTAGAGTCATTGATGTTCCCTCTAAAATACAGTTATCCTTACATTCCAATCCTGCCGTCGCGGTTACTAGAAGTGCTGAGTTCTCCAACGCCCTTCATCATCGGCGTGCACTCCGTGTTTCAAAGTGAGATTCAGGAACTGGTTTTGCACCCGGACCTGGAAGTAGCAGATAATGCTTTTCCACCTCCACGCACTGCTTCCTCCAATATTAAATTGCTGGACAAAGAGGTGCGAGGTGTATTTCTCCGGTTATTTGCACAGATCTTTCAGGGGTACAGGTCATGCTTGCAATTGATTCGCATCCATTCAGAGCCTGTTATCCACTTCCACAAGTTAGTTGCCTTTGATGTTGAAAGATttaaagaggaggaggagaaccCCAAAAAGTTACAGAAACGTATTCGGGAACTTGCAGAGCAGCTTGAGAAAAATGAGAACCCTAATCCTCACATGGCGTTCCAGAAGGTGCCTAGGCCCACGGAGGGCTCCCATTTGCGTGTACACGTGATGCCTTTTCCCCGGGTGAATGAGGAGAGGGTGCAGGCCCTGCTTCAGGAGGGGTTAGCCAAGCACCACAACAACCCCCCTCCTGCCCGGGCCGAGAAGAAATGTGTGGTGCCCGCTGGGCCACCCGTGGTCTCCATAATGGCCAAAACTGGGTCAGTTTTCAACAGTGCACGGAGACTGGAAGTAGTAAGGAGTTGTATCGCATTTGTCTTTGATAATAAAATACTGGAGACTGAAAagACTCTGCCAGCTGCTCTGCGGGCTCTGAAGGGGAAGGCCGCCCGCCAGTGCCTGACTGAAGAACTCAGCCTACATGTGCAGCAGAACCGGGCCATTCTAGACCACCAGCAGTTTGATTACATTGTGCGCATGATGAATTGTGCATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007223 True 993 mRNA 0.50 8 7838818 7844361

Neighbor

gene id symbol gene type direction distance location
AMCG00007219 rnf141,LOC102797002,LOC100693732 coding upstream 128529 7708259 ~ 7710289 (+)
AMCG00007220 NA coding upstream 133975 7702259 ~ 7704843 (+)
AMCG00007217 NA coding upstream 142213 7680455 ~ 7696605 (+)
AMCG00007218 NA coding upstream 179581 7657532 ~ 7659237 (+)
AMCG00007216 LOC102797294,LOC104954180,LOC108251745 coding upstream 188787 7640451 ~ 7650031 (+)
AMCG00007225 NA coding downstream 21017 7865378 ~ 7887173 (+)
AMCG00007224 tmem41b,LOC106562360 coding downstream 127915 7972276 ~ 7984466 (+)
AMCG00007234 dennd5a coding downstream 161208 8005569 ~ 8037874 (+)
AMCG00007233 fa60a,LOC108413309,LOC105015234,LOC107562797,LOC107694455 coding downstream 195333 8039694 ~ 8043027 (+)
AMCG00007235 NA coding downstream 205759 8050120 ~ 8071159 (+)
G22038 NA non-coding upstream 133459 7705148 ~ 7705359 (+)
G22027 NA non-coding upstream 162941 7669719 ~ 7675877 (+)
G21985 NA non-coding upstream 231747 7606579 ~ 7607071 (+)
G21949 NA non-coding upstream 307048 7531563 ~ 7531770 (+)
G21924 NA non-coding upstream 341719 7496693 ~ 7497099 (+)
G22076 NA non-coding downstream 56418 7900779 ~ 7901175 (+)
G22192 NA non-coding downstream 409532 8253893 ~ 8254655 (+)
G22204 NA non-coding downstream 600564 8444925 ~ 8445550 (+)
G22208 NA non-coding downstream 605723 8450084 ~ 8450494 (+)
G22209 NA non-coding downstream 606406 8450767 ~ 8450978 (+)
G21891 NA other upstream 459872 7374323 ~ 7378946 (+)
AMCG00007196 svip other upstream 620343 7211564 ~ 7218475 (+)
AMCG00007160 NA other upstream 2063362 5757677 ~ 5775456 (+)
AMCG00007154 ptpmt1,LOC102795413 other upstream 2166673 5668196 ~ 5672145 (+)
AMCG00007148 NA other upstream 2258524 5565941 ~ 5580294 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other downstream 303037 8147398 ~ 8183421 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other downstream 523075 8367436 ~ 8396242 (+)
AMCG00007242 NA other downstream 586741 8431102 ~ 8451582 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other downstream 853622 8697983 ~ 8711311 (+)
G22372 NA other downstream 1592163 9436524 ~ 9499728 (+)

Expression


Co-expression Network