AMCG00007237


Basic Information

Item Value
gene id AMCG00007237
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 8080173 ~ 8087434 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007237
TTTTCTGGGTTTGCTGGCAGATCTTCGACATGTTTTATTCGGGTGTCCTGACGGAAGGCAGCAGGAAGGACATGGACCTGCGAGAGGCGGCTGCCCTGAGGCAGCAGAGGAGGATGAAGCAGGCGGTGCAGTTTATCCACAAGGACTCGGCAGACCTGCTGCCATTAGACGGACTAAAGAAATTGGGATCTTCCAAAGAAATGCAGCCCCACAGCATTCTGCAGAGACGATTACTGGAAACGAATTTGTCGCGGTTCCGATTGAACAACCGTGGACCCAAACCTGCAAACAATGGGATAGTTGTACAGAGCAATGGCATTCACCACAGTAAGCAGGAGAGCCTGATAACCCAAGAGGAGGAGGACCTCATATTTGTGTCCTGCAAGTGTTCTGGAAGGGAGATAAAGGTCTTAATTGACACTGGCTGCAAGTTTAACCTCATTTCAGCTGCCTGTCTGGATCGGCTTGGTTTAAAGGAAGCTGTCAACATGAATAAAATGGAAACGGACACTCTCCTGTTTCCACGTAATTTGCAAGTCTTGGGACAGATCGAAAAAATGAGCCTGACGATTGGACAAGTGAAGGCTGACTGCTCAGTACTTGTTGTTGaaAGTGACAGGCAGTTTATGTCTCTGGGCAACAGAACTCTGAGGTCATTGAAGTGTGTTATAGACACAGAAAAGCAATTCCTGGTTCTGGGTCGAACAGAAAGGGAGCAAGTTGAGTTTATTGATGGTAAAAGCATGTCACGCGAGGAAAGGACTGAGTATCTCATTTTCTCGGAAGGGCCAGGTGCCCTTGCGTGTCATTCCACGATGACAGACAACCAATCTTCAGGTGCTGTCCTGGCCCAGGAAGCTCACTAA

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007237 True 866 mRNA 0.48 7 8080173 8087434

Neighbor

gene id symbol gene type direction distance location
AMCG00007236 NA coding upstream 311 8073768 ~ 8079862 (+)
AMCG00007235 NA coding upstream 9014 8050120 ~ 8071159 (+)
AMCG00007233 fa60a,LOC108413309,LOC105015234,LOC107562797,LOC107694455 coding upstream 37146 8039694 ~ 8043027 (+)
AMCG00007234 dennd5a coding upstream 42299 8005569 ~ 8037874 (+)
AMCG00007224 tmem41b,LOC106562360 coding upstream 95707 7972276 ~ 7984466 (+)
AMCG00007230 tmem9b,LOC107700603,LOC107754675,LOC107585953,LOC107750540,LOC107674442 coding downstream 4595 8092029 ~ 8096182 (+)
AMCG00007231 NA coding downstream 10631 8098065 ~ 8101788 (+)
AMCG00007244 NA coding downstream 99985 8187419 ~ 8205121 (+)
AMCG00007245 rergl,LOC104925113 coding downstream 130144 8217578 ~ 8221636 (+)
AMCG00007241 NA coding downstream 154750 8242184 ~ 8251819 (+)
G22076 NA non-coding upstream 178998 7900779 ~ 7901175 (+)
G22038 NA non-coding upstream 374814 7705148 ~ 7705359 (+)
G22027 NA non-coding upstream 404296 7669719 ~ 7675877 (+)
G21985 NA non-coding upstream 473102 7606579 ~ 7607071 (+)
G21949 NA non-coding upstream 548403 7531563 ~ 7531770 (+)
G22192 NA non-coding downstream 166459 8253893 ~ 8254655 (+)
G22204 NA non-coding downstream 357491 8444925 ~ 8445550 (+)
G22208 NA non-coding downstream 362650 8450084 ~ 8450494 (+)
G22209 NA non-coding downstream 363333 8450767 ~ 8450978 (+)
G22211 NA non-coding downstream 396828 8484262 ~ 8484504 (+)
G21891 NA other upstream 701227 7374323 ~ 7378946 (+)
AMCG00007196 svip other upstream 861698 7211564 ~ 7218475 (+)
AMCG00007160 NA other upstream 2304717 5757677 ~ 5775456 (+)
AMCG00007154 ptpmt1,LOC102795413 other upstream 2408028 5668196 ~ 5672145 (+)
AMCG00007148 NA other upstream 2499879 5565941 ~ 5580294 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other downstream 59964 8147398 ~ 8183421 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other downstream 280002 8367436 ~ 8396242 (+)
AMCG00007242 NA other downstream 343668 8431102 ~ 8451582 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other downstream 610549 8697983 ~ 8711311 (+)
G22372 NA other downstream 1349090 9436524 ~ 9499728 (+)

Expression


Co-expression Network