AMCG00007304


Basic Information

Item Value
gene id AMCG00007304
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10577246 ~ 10609015 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00007304
ATGGAGGTCAATCAAGAACCAAAACCACCAAAGCGGGAAGTCCCAGCAGAGAAGGTGAAAATAAGAACCAAGTTCAGCAGGAAGGAGGGGGAGTTTGTGATCAGCCATGGTCCCACTGGCATCTCCAGGCTCCGTGTTGTTCCCTCCTTCCTTCCCGTGTCCGAAGCAGACTGGGCATTTGCAAGGCTTCACGAGGAGCTCCCGTGGCAACAGAAATGTAACGTGAGGCAAGGAGTTTCCTATGCAGAGCCTAGGCTGACATGTTGGTTTGGAGAGCTGCCTTATACCTACTCCCATTCCACTCTGCAGGCCAACTCACAGTGGCATCCTGTCCTGCTGGAGCTGAAGCACCGAGTGGAGCTGGCGTCCGGTTGCTCCTTCAACTCTCTGCTGTGTAACCTGTACCGAGACTGCAAGGACAGTATCGCCTGGCACAGTGACTCTGAGCCCTCGCTCGGGTCCCGGCCCACCATCGCCTCTCTCAGCCTGGGGGACTCCCGCAACTTCCATATGCGCAAACGGCCTGGCCCGcatCAGGTACCCAAAGAGTACCACGACAGGGGCCCGCGGATCAATCTGACGTTCCGCACTATCTACCCAGAACCCGGCttTAATGAAAGCATCAAACGAATTGCAGCCTTGCTGAGAGTTTCTTCTCTGACATTTCTAGTTGTCATGGCAACCCTTCCGCAGTTGCTCAAAGAGAACTGGAAAGACTAA

Function

GO: NA

KEGG:

id description
K10860 ALKBH3, DEPC1; mRNA N1-methyladenine demethylase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00007304 True 720 mRNA 0.55 11 10577246 10609015

Neighbor

gene id symbol gene type direction distance location
AMCG00007303 NA coding upstream 82 10534157 ~ 10577164 (+)
AMCG00007300 LOC106562579,LOC106593862,LOC106597634 coding upstream 156335 10394165 ~ 10420911 (+)
AMCG00007301 api5,LOC104957150 coding upstream 193963 10373970 ~ 10383283 (+)
AMCG00007292 NA coding upstream 219641 10343702 ~ 10357605 (+)
AMCG00007293 NA coding upstream 266429 10295558 ~ 10310817 (+)
AMCG00007308 NA coding downstream 19335 10628350 ~ 10654989 (+)
AMCG00007305 NA coding downstream 51166 10660181 ~ 10667295 (+)
AMCG00007306 rag1 coding downstream 130030 10739045 ~ 10743675 (+)
AMCG00007310 NA coding downstream 149819 10758834 ~ 10777707 (+)
AMCG00007311 NA coding downstream 979619 11588634 ~ 11603718 (+)
G22596 NA non-coding upstream 255388 10320469 ~ 10321858 (+)
G22528 NA non-coding upstream 335838 10152489 ~ 10241408 (+)
G22417 NA non-coding upstream 932499 9642597 ~ 9644747 (+)
G22373 NA non-coding upstream 1084579 9488712 ~ 9492667 (+)
G22364 NA non-coding upstream 1180766 9396221 ~ 9396480 (+)
G22652 NA non-coding downstream 17659 10626674 ~ 10685068 (+)
G22712 NA non-coding downstream 502328 11111343 ~ 11111723 (+)
G22720 NA non-coding downstream 620810 11229825 ~ 11230393 (+)
G22730 NA non-coding downstream 903138 11512153 ~ 11522358 (+)
G22738 NA non-coding downstream 931968 11540983 ~ 11541524 (+)
AMCG00007278 NA other upstream 611979 9936920 ~ 9965267 (+)
G22372 NA other upstream 1077518 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 1865935 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 2125664 8431102 ~ 8451582 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other upstream 2181004 8367436 ~ 8396242 (+)
AMCG00007307 clg19h11orf96 other downstream 2181 10611196 ~ 10613104 (+)
AMCG00007337 NA other downstream 3869658 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 4667696 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 4757646 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 6015375 16624390 ~ 16662700 (+)

Expression


Co-expression Network