AMCG00008157


Basic Information

Item Value
gene id AMCG00008157
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44106455 ~ 44131719 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008157
ATGAAGAAGCAAAACGTCAGGACCCTCTCTCTGATCCTCTGCATGTTTTCCTATCTCTTGGTGGGGGCGGCGGTCTTCGATGCCCTGGAGTCGGAATCCGAGAGCTCCAGGAAGAGGATCCTGGAGCAGAAACGCAacgaaatgaaaaagaaataccGCTTCTCGGAGGACGACTACCGGGAGATCGAGAGGGTGGTCTTGCAAGCAGAGCCCCACCGAGCCGGGAGGCAGTGGAAATTCGCAGGCTCTTTTTACTTTGCGATCACTGTCATCACTACCATAGGCAAGCAAAAAGGATATGGCCATGCGGCTCCTGGAACAGACGCTGGGAAAGTTTTCTGCATGTTCTACGCAGTGCTGGGCATCCCCCTGACCCTGGTGATGTTCCAGAGCCTGGGCGAGAGGATGAATACCTTTGTGCGCTACCTGTTGAAGAAGATCAAAGAATGTCTGGGCATGAGGAAGACCGAGGTGTCCATGGAGAACATGGTGCTGGTTGGCTTCCTCTCCTGTATCGGGACCTTGTGCATTGGTGCAGCAGCGTTCTCCCACTTTGAGGGCTGGACCTTCTTTCACTCTTATTACTACTGTTTCATCACCCTCACCACCATTGGCTTTGGGGACTTTGTGGCCCTGCAGAAGAAGGAGGACCTCCAAGAGAAGACTCCCTATGTGGCCTTCAGCTTCATGTACATCCTGGTGGGCCTGACTGTGATCGGGGCCTTTCTGAACTTGGTGGTCTTGCGTTTCCTCACCATGAACTCAGAGGACGAGAGGAGGGACGCCGAAGAGAGGGCTTCCCTGAAGAGAGAGCGGGACATAATCGCGCTGAGTATGGGGGACGATGGCCGGAGCAGGAGCACCCTCTTCCTGCCCATGGAGGAAGGAACGAGTCGCACCAATCTCATCCCCTCTGCCACGGAGGATCAGGAGAGCATGGAAAGGCAGCGGCCGTCCAAGTCGGAGTCCAAGATCGGTTCGTTCTGCTCCTGCATGTGCTACCGGTCCCAGAACTGCGACAGCCCGGCCACGTCTCACCAAGACCACTTGGGCTGCCACACCAACTCAGTCTACTACAACTCAATTTCTTACCGCATTGATGGCCACTCACTCAGCACCAGAGAAAACACAGCCCTATCCTCACCAGGGAGCATGGTATCCCCCTGCCATCGCAATTTCAGGGACTTCCTCCGAACCAGGAGGAAGTCGGTaattggaAAAAGTGTGGTTTACCAGGAGTTGGAGCAGCCGCGAAGGATATTCTTTGTGTCAGACAAAGGGGTCTGGGATCTGGACAATTGA

Function

GO: NA

KEGG:

id description
K04919 KCNK9, K2P9.1; potassium channel subfamily K member 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008157 True 1302 mRNA 0.55 7 44106455 44131719

Neighbor

gene id symbol gene type direction distance location
AMCG00008153 NA coding upstream 61645 44040778 ~ 44044810 (+)
AMCG00008156 NA coding upstream 70328 44034386 ~ 44036127 (+)
AMCG00008155 NA coding upstream 72115 44001734 ~ 44034340 (+)
AMCG00008154 NA coding upstream 106622 43976301 ~ 43999833 (+)
AMCG00008149 LOC106572085,LOC107705722 coding upstream 213357 43854025 ~ 43893098 (+)
AMCG00008160 NA coding downstream 128256 44259975 ~ 44268323 (+)
AMCG00008167 NA coding downstream 445653 44577372 ~ 44653905 (+)
AMCG00008162 cdh4,LOC106571924 coding downstream 533917 44665636 ~ 44683700 (+)
AMCG00008161 lsm14a,lsm14b,LOC105018105 coding downstream 611911 44743630 ~ 44748571 (+)
AMCG00008169 ss18l1 coding downstream 621326 44753045 ~ 44760831 (+)
G28931 col9a3,LOC106571930 non-coding upstream 49847 44053965 ~ 44056608 (+)
G28862 NA non-coding upstream 210504 43894109 ~ 43895951 (+)
G28678 NA non-coding upstream 905252 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 985674 43109050 ~ 43120781 (+)
G28548 NA non-coding upstream 1484298 42621950 ~ 42622157 (+)
G28956 NA non-coding downstream 559822 44691541 ~ 44749908 (+)
G28991 NA non-coding downstream 636958 44768677 ~ 44816663 (+)
G28995 NA non-coding downstream 664205 44795924 ~ 44798463 (+)
G29148 NA non-coding downstream 1221997 45353716 ~ 45354079 (+)
G29153 NA non-coding downstream 1246292 45378011 ~ 45378353 (+)
AMCG00008132 NA other upstream 800925 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 950383 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 998213 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 1669227 42413632 ~ 42437228 (+)
G28395 NA other upstream 2113078 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 891429 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 1015678 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 1208855 45340574 ~ 45343914 (+)
G29183 NA other downstream 1308794 45440513 ~ 45441064 (+)
G29353 NA other downstream 2136172 46267891 ~ 46268327 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011695 kcnk3b coding NC_007128.7 CM002901.2 45454943 ~ 45459207 (+)
grasscarp (Ctenopharyngodon idella) CI01000315_01142173_01148181 KCNK3B coding CI01000315 null 1141750 ~ 1148419 (+)