AMCG00008263


Basic Information

Item Value
gene id AMCG00008263
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49163816 ~ 49171017 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008263
gcaGTAGAGATTCTGAAAGCTGAGAGAATTGGCCATGGCTACCACACAATAGATGACCAAGAGCTTTATcaacagctgctgcagcagaaCATGCATTTTGAGGTCTGTCCAATATCCAGTAAATACACAGGAGCCTGCCCTGCAGATTTCTCAAAGCATCCTGCTATCAGgtTTAAAGAAGACAAAGCCAACTACTCCCTGAACACAGATGACCCTTTGATATTTGACTCCACCCTGGACACAGACTACAAAACAGCCAAGACCTACATGGGCTTCACGGAGGAGGAGTTCATGAGGGTGaATCTAAATGCTGCTCGCTCAAGTTTCTTGCCcgagaaggaaaagaaagaccTTGTGAACAGCCTGTACGAGGCATACGGAATGATCCAGAAGACTGAACTCTGA
>TU37226
tgaaaatttgggaacatttaaaaatagactggataggatccttggatcaggtggttattaatggacaccaaatgagtacgatgggtcgaatggcctcctctcgtttgtaaactttcttatgtttaccctggttaaggatgtctgttaagtaaattatacataataGTATATGCAAAAAGTAATGTTTGCAGTTAcgaatctgcagaaagagtaataaattaagggagccacactgtgccgtttaaaatacatatatactagcacaaattatgatgataataataacaatacatatttgctatttagtattattgttgcacatggaaacgtattcttatgggaacgtgtttgtctgaatataatgttgtctatacatgtttagctcttcctaacaTCTCTTAatagaaacatgtatttattacactgtttacaatcatgtaaagcagaaagaataaaatagacaaaagTCCTTTCCTCATCAGGCtatatcgctcgtagtgttgttctctgaaacacaaaccaaacccacaatcgctctgctcctcctataacagggacggacttcacaacggcctggttttacaaaaaaagctctgggacgcgtccggcacggcatggcacggacgtttaagccagtggaactgaggcattagttattaatgcacaccaaatgagcatgatgggtcaaatggcctcctctcgtttataaactttcttatgatctttaggtgatgtgaaacatgattttgcatattgaaacaataaaaaaagaatctgCACGTTATCTtgcattatgtatattttgttattccaagctaAATTCtgagtatatataaaaaatattcaaGCGATTTCCTTTCAAAAGATACCATCCATATGCATGAGTTATGGGCTTTTGAAATAGAGCTGGTCCTTTTAGAAGGAAATTCCCATTTTTGCCTGTCAGCTTAAGAGGTTAAGTTTAACATTGAATAGATTTTATGATAGGTTGCAAAAGTTTCGGTATAAGCTACTTAATAACTTTCAATTAATGGTGTCTACAGGAAGCAGTCAGAAGTGGAATCCACAGAACTGTTCATGCAGGAGAGGTTGGGCCCCCTTCTGTTGTAAAAGAGgcaGTAGAGATTCTGAAAGCTGAGAGAATTGGCCATGGCTACCACACAATAGATGACCAAGAGCTTTATcaacagctgctgcagcagaaCATGCATTTTGAGGTCTGTCCAATATCCAGTAAATACACAGGAGCCTGCCCTGCAGATTTCTCAAAGCATCCTGCTATCAGgtTTAAAGAAGACAAAGCCAACTACTCCCTGAACACAGATGACCCTTTGATATTTGACTCCACCCTGGACACAGACTACAAAACAGCCAAGACCTACATGGGCTTCACGGAGGAGGAGTTCATGAGGGTGaATCTAAATGCTGCTCGCTCAAGTTTCTTGCCcgagaaggaaaagaaagaccTTGTGAACAGCCTGTACGAGGCATACGGAATGATCCAGAAGACTGAACTCTGAAGAAAGTTATGATTTTGCATTATAGAACATGCAGTAGAAAACAATCCAGGGGCTCCACACTTACTTCCTTTACTGTACACTTAGGGAAGGGGAAAGgaatacaattttgaatttgaggTGGCTCATAAAAGcttaagaaaatgtatctgCATTGTCTCTTTCTATAGTTATAGTTGTGCAGCCGTGCATATTGAGTGGGTGTTGACTAACAGCTTTTTTGGGAGCTGCAACTACAGAGAAGTCTGCACTGCAGAGATAAACTGGGGTACCTTCTGTACATATACGCCTAGCAGGGTCGGATTGGGACTTTGTGCCTATTTGTGCCTATTTATCAACTACAGAAAGACTAgcaagtacaaaaaaaacatgtatatcaAAATCTCTCTGTTGCAAGATAATCATATAGATTTTGTACACTTCTGCAATAACTATAGGAAGGACAGTATTATACAAATGTCTGTATGTTATGTCACATTTAAGCattggaaaaacacattaatagcAATAAATAAGTATACAAATTTTATAAGAATAagagttttgcattttgatttcaaTTTATAATGCACCAGCCTAGATTAGGTTCAAAGAGCAGTCTCGGGTTTCTCCAGGTGCTCTTAATTGCAAAGCAACACAGGgctttatatgaaatgtatatgcTCTGATATGCTGTCTGAACACTAATAATTTGAATTGGAGTGATGCCTACATCCCTCTTCTATGTATACTATCTATGGAACAAAAACTAttacgttttattttttattttatcttaagTATTAAATCAGGACATGGTTGTGATCCAGCTTTAGGTTAACCTACAGCCATCTTGCAAGCTTCCTGTGCTAATTGAAGTGCTAATTATATATCTGCACAATAGGTGGTGCTCTTGGCCCACGTTGAAAAAGATTTCTATAAAATTGAGAATATGCTATTTAAAATACTCTTATTGCTGGGAAGTTAAATTGTCTGAAAgacttattgtttttgttgaatgtagattagaaatgtatttaatgaaattaaaagaggtttcaatttgaatatattttgtatttaatttagaacctctctttttttcccttcagt

Function

GO:

id name namespace
GO:0042110 T cell activation biological_process
GO:0060169 negative regulation of adenosine receptor signaling pathway biological_process
GO:0046103 inosine biosynthetic process biological_process
GO:0006154 adenosine catabolic process biological_process
GO:0043103 hypoxanthine salvage biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0009168 purine ribonucleoside monophosphate biosynthetic process biological_process
GO:0005829 cytosol cellular_component
GO:0009897 external side of plasma membrane cellular_component
GO:0060205 cytoplasmic vesicle lumen cellular_component
GO:0030054 cell junction cellular_component
GO:0004000 adenosine deaminase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008263 False 405 mRNA 0.46 4 49165357 49169928
TU37226 True 2609 TUCP 0.37 5 49163816 49171017

Neighbor

gene id symbol gene type direction distance location
AMCG00008262 stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842 coding upstream 223721 48923864 ~ 48940095 (+)
AMCG00008250 NA coding upstream 689284 48462293 ~ 48474532 (+)
AMCG00008253 stau1 coding upstream 787745 48347747 ~ 48376071 (+)
AMCG00008252 cse1l coding upstream 837678 48292639 ~ 48326138 (+)
AMCG00008251 arfgef2,LOC106532188 coding upstream 888468 48235687 ~ 48275348 (+)
AMCG00008272 NA coding downstream 298272 49469289 ~ 49471615 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding downstream 378889 49549906 ~ 49560080 (+)
AMCG00008281 NA coding downstream 416050 49587067 ~ 49596793 (+)
AMCG00008283 NA coding downstream 708962 49879979 ~ 49881352 (+)
AMCG00008291 NA coding downstream 1187970 50358987 ~ 50359865 (+)
G29748 NA non-coding upstream 16591 49139140 ~ 49147225 (+)
G29742 NA non-coding upstream 58372 49105213 ~ 49105444 (+)
G29722 NA non-coding upstream 196596 48966956 ~ 48967220 (+)
G29692 NA non-coding upstream 343122 48820475 ~ 48820694 (+)
G29677 NA non-coding upstream 359911 48762685 ~ 48803905 (+)
G29813 NA non-coding downstream 173021 49344038 ~ 49348022 (+)
G29823 NA non-coding downstream 197628 49368645 ~ 49379374 (+)
G29848 NA non-coding downstream 344467 49515484 ~ 49938346 (+)
G29853 NA non-coding downstream 373345 49544362 ~ 49544731 (+)
G29877 NA non-coding downstream 625427 49796444 ~ 49797983 (+)
AMCG00008249 NA other upstream 1222062 47929667 ~ 47941754 (+)
AMCG00008241 LOC106596195,LOC106601018,LOC105896344,LOC105896343 other upstream 1245688 47913868 ~ 47918128 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other upstream 1271745 47863569 ~ 47892071 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other upstream 1447234 47664517 ~ 47716582 (+)
AMCG00008232 ddx27 other upstream 1492395 47622952 ~ 47671421 (+)
AMCG00008270 ttpal other downstream 117229 49288246 ~ 49295359 (+)
AMCG00008271 NA other downstream 233839 49404856 ~ 49418746 (+)
AMCG00008279 NA other downstream 668495 49839512 ~ 49858576 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other downstream 1151696 50322713 ~ 50356404 (+)
G30166 NA other downstream 2255564 51426581 ~ 51428055 (+)

Expression


Co-expression Network