AMCG00008319


Basic Information

Item Value
gene id AMCG00008319
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52356501 ~ 52362043 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008319
ATGTCAGAGACGCTGATCACTGGGCAGACCTCGGAGGATCTTCTGGCCGACTTTGAGTCCATTTTGGGAGCCGGCAGCATTGAGTTAAACGAGCAGCAGATTGTCATCATCTCCACCCCAGGAAATGTGGACATCCATTCCGCAGCCTCCACCAGCACTGGGGAGATCCTGCTGTTCGCCACCCCGCAGGGCCTCAAGTCCTCCATGGAGAAGTCTCGCTATGATACCTCTCTGAATCTCACCACCAAGCGCTTCCTGGAGCTCCTAGCCAAGTCACCTGATGGGGTGGTTGACCTCAACTGGGCCTCGCAGGTCCTTGAGGTCCAGAAACGCCGCATCTATGACATCACCAACGTCCTGGAGGGCATCAAGCTCATTTCCAAGAAATCCAAGAACAACATTCAGTGGCTTCTGCTGAAGGAGGTGTCGGACCTGGGGGAGGCGGAGCAGAGACTGGACGAGCTCATTGCGAAAAGTAACCTGCAGCTCAGACTGCTCACCGAGGATCCTGAGAACAAGCAATATCCTTTTCAATTCAGGATGCAGGGGATTTCCCCTTATTACACGCTGGCATATGTGATGTGCCAGGACCTGAGGAACACTGTGGACCCCCCCGACCAGCTTCTGATGGTGGTTAGGGCTCCTCCAGAGACACAGATGCAGGTTTTAGACCCCTCAGAGGGGTTTCAGATCTCTCTCAAAAGCACCCAAGGCCCCATCGATGTGTTCCTGTGCCCAGAAGACAACGCTGGGGTCTGCAGCCCGGTGACAGGAAATAGCCCCTCCAAAGCAGCCAGTCAGGCATCGCCTGCTCCCGCCCCTAGCTCCACAAGCACCAATGAGCAGCCGCAGTGCAGCAAGCCCCAGGAAGTGACATCGCCCCCTCGGGAGGCTGCACTGCTACTCACAGAGTCTTTGATGGCGGCGGACGCCTTCTCCAGTCTGGGAGCGTTGCCCGACTTTGACCTGGCCACCCTGCCGTCCTCTGATTACCTGCTGGACAGGAGTCCTGAGGAGTTCTCCTCACTCCCGTTGGACAGCTTCATTAATCTTTCCCCTCCCCAGGTTCACGACTACCACTTCGGGCTTGGGGAGGGCGAGGGCATCAGCGAACTCTTTGACTGTGATTTCGGGGATCTGGCGCCCCTAGACTTTTGA

Function

GO: NA

KEGG:

id description
K17454 E2F1; transcription factor E2F1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008319 True 1158 mRNA 0.57 6 52356501 52362043

Neighbor

gene id symbol gene type direction distance location
AMCG00008321 NA coding downstream 10974 52345029 ~ 52345527 (-)
AMCG00008322 NA coding downstream 63087 52252677 ~ 52293414 (-)
AMCG00008314 NA coding downstream 106405 52189182 ~ 52250096 (-)
AMCG00008313 cbln4,LOC106567122 coding downstream 211774 52137169 ~ 52144727 (-)
AMCG00008312 NA coding downstream 286692 52068482 ~ 52069809 (-)
AMCG00008317 pxmp4,LOC103464829 coding upstream 4110 52366153 ~ 52370382 (-)
AMCG00008323 NA coding upstream 24317 52386360 ~ 52388370 (-)
AMCG00008324 LOC106566898 coding upstream 26752 52388795 ~ 52425671 (-)
AMCG00008329 cbfa2t2 coding upstream 131298 52493341 ~ 52505322 (-)
AMCG00008331 NA coding upstream 210077 52572120 ~ 52584025 (-)
G30276 NA non-coding downstream 30110 52326161 ~ 52326391 (-)
G30275 NA non-coding downstream 30464 52325705 ~ 52326037 (-)
G30270 NA non-coding downstream 67378 52288890 ~ 52289123 (-)
G30266 NA non-coding downstream 77382 52278857 ~ 52279119 (-)
G30237 NA non-coding downstream 199422 52156790 ~ 52157079 (-)
G30409 NA non-coding upstream 717541 53079584 ~ 53082902 (-)
G30417 NA non-coding upstream 783142 53145185 ~ 53148173 (-)
G30479 NA non-coding upstream 1049951 53411994 ~ 53416431 (-)
G30486 NA non-coding upstream 1068909 53430952 ~ 53434101 (-)
G30505 NA non-coding upstream 1124798 53486841 ~ 53491107 (-)
AMCG00008318 NA other downstream 17404 52329236 ~ 52339097 (-)
AMCG00008298 NA other downstream 1828465 50523987 ~ 50528036 (-)
G30054 NA other downstream 2082318 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 2302399 50053825 ~ 50054102 (-)
G29928 NA other downstream 2451412 49795971 ~ 49905089 (-)
AMCG00008325 znf341,LOC106566899 other upstream 19013 52381056 ~ 52384567 (-)

Expression


Co-expression Network