AMCG00008323


Basic Information

Item Value
gene id AMCG00008323
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 52386360 ~ 52388370 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008323
ATGTCTTTCAGAGCGCTGTGCGGTGGTCAGGTCATGGCAGCCTGTGGGGGTGTATGGGATCGGCGGTTCCTTGCAGCTCTGGGTGGGGAGTTTGTGGCCGTGTTCCTCTTCATGCTGATCAGTTTGGGTTCCACAGTGTCTCTGGATGACGGCGCGGTGCCCTCGACCCACATCGCCCTGTGTTTCGGGTTTACTGTGGCTGTGCTGGTCCATTCATTTGGACACATCTGCGAGGCCTGCCTCAACCCTGCCGTGGTGCTGGCCATGGTCCTCACCCGAAAGATCACCATCGCCAAAGGGTTCCTCTACATTGTCGTCCAGTGCTTGGCTTCCTTTACCGGGACGGCATTTGTGTTTCTAGCAACACGAGCAGAGTACAGAAAAGCTTTCGGAGTCACTAAGGTGAACACCAGCATCACCGTTGGCCAAGCTCTGCTCATTGAGAGCACTACCACCCTCCTCCTGGTCTTTGCACTCTTTGCCTCCTGCGATCGGAACAGGACAGACGCCCGACTCCCGGCTTCCCTGATCATTGGGCTGGCAGTGGCTGCGGGACACCTCTTTGCGGTGCCCTTGACTGGTGCCAGTATGAATCCTGCCAGGTCACTGGGGCCCAGCCTGCTGTTCTGTGAGTGGGAGCATCACTGGGTGTACTGGGTGGGACCCACTATGGGAGCGGTGGCTGCATGCTTCCTGTACGACTTCCTGTTGTGTCCCGACCCAGAGCTCAAGAGGCGACTCAAAGCACCCCCACACCTGGTGGAGAAGCCGGAGGAAAAGGAGCTGTTCGAAGTCGGGGTTAGAGTAACGCCGGAGGACAAGGATGGGATCCAA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006833 water transport biological_process
GO:0005372 water transmembrane transporter activity molecular_function

KEGG:

id description
K09872 PIP; aquaporin PIP

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008323 True 834 mRNA 0.58 4 52386360 52388370

Neighbor

gene id symbol gene type direction distance location
AMCG00008317 pxmp4,LOC103464829 coding downstream 15978 52366153 ~ 52370382 (-)
AMCG00008319 NA coding downstream 24317 52356501 ~ 52362043 (-)
AMCG00008321 NA coding downstream 40833 52345029 ~ 52345527 (-)
AMCG00008322 NA coding downstream 92946 52252677 ~ 52293414 (-)
AMCG00008314 NA coding downstream 136264 52189182 ~ 52250096 (-)
AMCG00008324 LOC106566898 coding upstream 425 52388795 ~ 52425671 (-)
AMCG00008329 cbfa2t2 coding upstream 104971 52493341 ~ 52505322 (-)
AMCG00008331 NA coding upstream 183750 52572120 ~ 52584025 (-)
AMCG00008332 NA coding upstream 238145 52626515 ~ 52649562 (-)
AMCG00008340 NA coding upstream 888009 53276379 ~ 53281571 (-)
G30276 NA non-coding downstream 59969 52326161 ~ 52326391 (-)
G30275 NA non-coding downstream 60323 52325705 ~ 52326037 (-)
G30270 NA non-coding downstream 97237 52288890 ~ 52289123 (-)
G30266 NA non-coding downstream 107241 52278857 ~ 52279119 (-)
G30237 NA non-coding downstream 229281 52156790 ~ 52157079 (-)
G30409 NA non-coding upstream 691214 53079584 ~ 53082902 (-)
G30417 NA non-coding upstream 756815 53145185 ~ 53148173 (-)
G30479 NA non-coding upstream 1023624 53411994 ~ 53416431 (-)
G30486 NA non-coding upstream 1042582 53430952 ~ 53434101 (-)
G30505 NA non-coding upstream 1098471 53486841 ~ 53491107 (-)
AMCG00008325 znf341,LOC106566899 other downstream 1793 52381056 ~ 52384567 (-)
AMCG00008318 NA other downstream 47263 52329236 ~ 52339097 (-)
AMCG00008298 NA other downstream 1858324 50523987 ~ 50528036 (-)
G30054 NA other downstream 2112177 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 2332258 50053825 ~ 50054102 (-)

Expression


Co-expression Network