G22027


Basic Information

Item Value
gene id G22027
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7669719 ~ 7675877 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU27601
GTTGCTGAGGCTTTTTGAGCAGCCTCACTGCAAGCAAAAGAGTCAGATGAAACATTGCCCTTAAATGGTAAAAGCTCCCAGGAGTGAAAGAGAGGCtggcttgaaaaaaaaaaaagacaaggaatTGTTCAGCTTTAGGTAAAATCTCAAAATCCAAGGAATCTGGATAGCGTCTGTTGATTGTTATGTTCTGCTTTTAAGCACATCTGGGACCTTCAGCTGAGAGTAAGGTGAAAGAGGGTTCATCTACGAATCTGAAAGTCCATCATCTTTTCTTCACCCTTTGTTCACGGCAGCATTGTGTCAGCAATGATCAATTGCAACTTCACACTTCTCTTCTAGATGCATTGGCTTTGGAGCTTCTGAAAACCCGGCCACGGCCACGAGACTGTTGTGTCAAACCACTATTGCCTAGTCACAGTCAGGGAAGATGTCACAACTGCTTATCTGAACATAGATGTGAATGTAAAGCGACTGAAGAAAATGTAGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27601 True 493 lncRNA 0.43 3 7669719 7675877

Neighbor

gene id symbol gene type direction distance location
AMCG00007218 NA coding upstream 10482 7657532 ~ 7659237 (+)
AMCG00007216 LOC102797294,LOC104954180,LOC108251745 coding upstream 19688 7640451 ~ 7650031 (+)
AMCG00007208 LOC108430817 coding upstream 123025 7535567 ~ 7546694 (+)
AMCG00007209 LOC107553077,LOC107557708,LOC107740430 coding upstream 155747 7513065 ~ 7513972 (+)
AMCG00007203 NA coding upstream 264902 7398093 ~ 7404817 (+)
AMCG00007217 NA coding downstream 4578 7680455 ~ 7696605 (+)
AMCG00007220 NA coding downstream 26382 7702259 ~ 7704843 (+)
AMCG00007219 rnf141,LOC102797002,LOC100693732 coding downstream 32382 7708259 ~ 7710289 (+)
AMCG00007223 NA coding downstream 162941 7838818 ~ 7844361 (+)
AMCG00007225 NA coding downstream 189501 7865378 ~ 7887173 (+)
G21985 NA non-coding upstream 62648 7606579 ~ 7607071 (+)
G21949 NA non-coding upstream 137949 7531563 ~ 7531770 (+)
G21924 NA non-coding upstream 172620 7496693 ~ 7497099 (+)
G21902 NA non-coding upstream 202494 7412617 ~ 7467225 (+)
G21894 NA non-coding upstream 281544 7386719 ~ 7388175 (+)
G22038 NA non-coding downstream 29271 7705148 ~ 7705359 (+)
G22076 NA non-coding downstream 224902 7900779 ~ 7901175 (+)
G22192 NA non-coding downstream 578016 8253893 ~ 8254655 (+)
G22204 NA non-coding downstream 769048 8444925 ~ 8445550 (+)
G22208 NA non-coding downstream 774207 8450084 ~ 8450494 (+)
G21891 NA other upstream 290773 7374323 ~ 7378946 (+)
AMCG00007196 svip other upstream 451244 7211564 ~ 7218475 (+)
AMCG00007160 NA other upstream 1894263 5757677 ~ 5775456 (+)
AMCG00007154 ptpmt1,LOC102795413 other upstream 1997574 5668196 ~ 5672145 (+)
AMCG00007148 NA other upstream 2089425 5565941 ~ 5580294 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other downstream 471521 8147398 ~ 8183421 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other downstream 691559 8367436 ~ 8396242 (+)
AMCG00007242 NA other downstream 755225 8431102 ~ 8451582 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other downstream 1022106 8697983 ~ 8711311 (+)
G22372 NA other downstream 1760647 9436524 ~ 9499728 (+)

Expression


Co-expression Network