G22076


Basic Information

Item Value
gene id G22076
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7900779 ~ 7901175 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU27671
aaaaggaagaaaaaagacaacacTTCCAGTTTATTAACATCTTTATTAAAGTGAGtccagtttcagttttaaaaagcttCCACTAAACCTTTTTTCaatgttaaataatgtttaatatatttagcaATCATGGTTCACAAATATTAAGGAAGGAGAGCTTCAGACTGAAACGTTACATGCATGTATGACAGTGAGAAATGGTTACTGACATGAATTCCCTTAGGTCATATatctataaaatgtgaatacAGTAAAGAATCAACGGATTCCATTTCTCTCATAcaaaaattaatgttttaacctACTATATGCAAAACAGAACTTGTAAAAAGTAGGtaagtacaaatataaaacttgaATACAACAGTAAAATAAGATTTTAGTTGAAAAAAAANNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27671 True 397 lncRNA 0.28 1 7900779 7901175

Neighbor

gene id symbol gene type direction distance location
AMCG00007225 NA coding upstream 13606 7865378 ~ 7887173 (+)
AMCG00007223 NA coding upstream 56418 7838818 ~ 7844361 (+)
AMCG00007219 rnf141,LOC102797002,LOC100693732 coding upstream 190490 7708259 ~ 7710289 (+)
AMCG00007220 NA coding upstream 195936 7702259 ~ 7704843 (+)
AMCG00007217 NA coding upstream 204174 7680455 ~ 7696605 (+)
AMCG00007224 tmem41b,LOC106562360 coding downstream 71101 7972276 ~ 7984466 (+)
AMCG00007234 dennd5a coding downstream 104394 8005569 ~ 8037874 (+)
AMCG00007233 fa60a,LOC108413309,LOC105015234,LOC107562797,LOC107694455 coding downstream 138519 8039694 ~ 8043027 (+)
AMCG00007235 NA coding downstream 148945 8050120 ~ 8071159 (+)
AMCG00007236 NA coding downstream 172593 8073768 ~ 8079862 (+)
G22038 NA non-coding upstream 195420 7705148 ~ 7705359 (+)
G22027 NA non-coding upstream 224902 7669719 ~ 7675877 (+)
G21985 NA non-coding upstream 293708 7606579 ~ 7607071 (+)
G21949 NA non-coding upstream 369009 7531563 ~ 7531770 (+)
G21924 NA non-coding upstream 403680 7496693 ~ 7497099 (+)
G22192 NA non-coding downstream 352718 8253893 ~ 8254655 (+)
G22204 NA non-coding downstream 543750 8444925 ~ 8445550 (+)
G22208 NA non-coding downstream 548909 8450084 ~ 8450494 (+)
G22209 NA non-coding downstream 549592 8450767 ~ 8450978 (+)
G22211 NA non-coding downstream 583087 8484262 ~ 8484504 (+)
G21891 NA other upstream 521833 7374323 ~ 7378946 (+)
AMCG00007196 svip other upstream 682304 7211564 ~ 7218475 (+)
AMCG00007160 NA other upstream 2125323 5757677 ~ 5775456 (+)
AMCG00007154 ptpmt1,LOC102795413 other upstream 2228634 5668196 ~ 5672145 (+)
AMCG00007148 NA other upstream 2320485 5565941 ~ 5580294 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other downstream 246223 8147398 ~ 8183421 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other downstream 466261 8367436 ~ 8396242 (+)
AMCG00007242 NA other downstream 529927 8431102 ~ 8451582 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other downstream 796808 8697983 ~ 8711311 (+)
G22372 NA other downstream 1535349 9436524 ~ 9499728 (+)

Expression


Co-expression Network