G22212


Basic Information

Item Value
gene id G22212
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 8492161 ~ 8492457 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU27843
aacattatgaccactgacaggtgaagtgaataacactgataatctcgttatcatggcacctgtcagtgggtgggatatattaggcagcaagtgaacattttgtcctcaaagttgatgtgttagaagcagcaaaaatgggcaagcgtaaggatctgagcgactttgacaagggccaaattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccagtctgcagtggtcagtacctatcaaaagtggtccaaggaaggaaaagcggtgaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27843 True 297 lncRNA 0.46 1 8492161 8492457

Neighbor

gene id symbol gene type direction distance location
AMCG00007241 NA coding upstream 240342 8242184 ~ 8251819 (+)
AMCG00007245 rergl,LOC104925113 coding upstream 270525 8217578 ~ 8221636 (+)
AMCG00007244 NA coding upstream 287040 8187419 ~ 8205121 (+)
AMCG00007231 NA coding upstream 390373 8098065 ~ 8101788 (+)
AMCG00007230 tmem9b,LOC107700603,LOC107754675,LOC107585953,LOC107750540,LOC107674442 coding upstream 395979 8092029 ~ 8096182 (+)
AMCG00007252 NA coding downstream 180032 8672489 ~ 8687381 (+)
AMCG00007250 insc,LOC106561064 coding downstream 258710 8751167 ~ 8762076 (+)
AMCG00007251 insc coding downstream 285512 8777969 ~ 8784734 (+)
AMCG00007254 NA coding downstream 388427 8880884 ~ 8957404 (+)
AMCG00007257 NA coding downstream 686446 9178903 ~ 9185848 (+)
G22211 NA non-coding upstream 7657 8484262 ~ 8484504 (+)
G22209 NA non-coding upstream 41183 8450767 ~ 8450978 (+)
G22208 NA non-coding upstream 41667 8450084 ~ 8450494 (+)
G22204 NA non-coding upstream 46611 8444925 ~ 8445550 (+)
G22192 NA non-coding upstream 237506 8253893 ~ 8254655 (+)
G22230 NA non-coding downstream 99682 8592139 ~ 8604058 (+)
G22285 NA non-coding downstream 483644 8976101 ~ 8978196 (+)
G22344 NA non-coding downstream 843261 9335718 ~ 9339100 (+)
G22364 NA non-coding downstream 903764 9396221 ~ 9396480 (+)
G22373 NA non-coding downstream 996255 9488712 ~ 9492667 (+)
AMCG00007242 NA other upstream 40579 8431102 ~ 8451582 (+)
AMCG00007243 rbtn1,lmo1,LOC108713718,LOC107593328,LOC106609843,LOC107725665,LOC107085592 other upstream 95919 8367436 ~ 8396242 (+)
AMCG00007232 rpl27a,LOC107687759,LOC107726310 other upstream 308740 8147398 ~ 8183421 (+)
G21891 NA other upstream 1113215 7374323 ~ 7378946 (+)
AMCG00007196 svip other upstream 1273686 7211564 ~ 7218475 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other downstream 205526 8697983 ~ 8711311 (+)
G22372 NA other downstream 944067 9436524 ~ 9499728 (+)
AMCG00007278 NA other downstream 1444463 9936920 ~ 9965267 (+)
AMCG00007307 clg19h11orf96 other downstream 2118739 10611196 ~ 10613104 (+)
AMCG00007337 NA other downstream 5986216 14478673 ~ 14489692 (+)

Expression


Co-expression Network